Protein–RNA interactions for Protein: O76064

RNF8, E3 ubiquitin-protein ligase RNF8, humanhuman

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF8O76064 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
RNF8O76064 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
RNF8O76064 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RNF8O76064 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RNF8O76064 AC067852.2-201ENST00000590513 2313 ntBASIC18.89■□□□□ 0.61
RNF8O76064 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF8O76064 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF8O76064 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF8O76064 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RNF8O76064 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RNF8O76064 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF8O76064 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RNF8O76064 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF8O76064 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF8O76064 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF8O76064 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF8O76064 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF8O76064 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF8O76064 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF8O76064 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF8O76064 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF8O76064 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
RNF8O76064 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF8O76064 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF8O76064 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF8O76064 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF8O76064 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF8O76064 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RNF8O76064 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF8O76064 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF8O76064 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF8O76064 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
RNF8O76064 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF8O76064 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RNF8O76064 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
RNF8O76064 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RNF8O76064 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF8O76064 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF8O76064 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF8O76064 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF8O76064 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF8O76064 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
RNF8O76064 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF8O76064 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF8O76064 HLA-F-220ENST00000434407 884 ntBASIC18.88■□□□□ 0.61
RNF8O76064 KRT18P48-201ENST00000434763 852 ntBASIC18.88■□□□□ 0.61
RNF8O76064 AC092647.4-201ENST00000457211 535 ntBASIC18.88■□□□□ 0.61
RNF8O76064 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF8O76064 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF8O76064 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF8O76064 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF8O76064 AC006011.2-201ENST00000621313 1158 ntBASIC18.88■□□□□ 0.61
RNF8O76064 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF8O76064 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF8O76064 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RNF8O76064 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF8O76064 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF8O76064 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF8O76064 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF8O76064 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF8O76064 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF8O76064 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RNF8O76064 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF8O76064 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF8O76064 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF8O76064 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF8O76064 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF8O76064 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RNF8O76064 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RNF8O76064 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF8O76064 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF8O76064 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF8O76064 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF8O76064 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF8O76064 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF8O76064 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF8O76064 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF8O76064 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF8O76064 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF8O76064 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF8O76064 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF8O76064 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF8O76064 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF8O76064 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF8O76064 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RNF8O76064 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RNF8O76064 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF8O76064 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF8O76064 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
RNF8O76064 LINC00167-201ENST00000530583 1419 ntBASIC18.87■□□□□ 0.61
RNF8O76064 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF8O76064 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF8O76064 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF8O76064 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
RNF8O76064 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RNF8O76064 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RNF8O76064 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF8O76064 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF8O76064 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF8O76064 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms