Protein–RNA interactions for Protein: O75387

SLC43A1, Large neutral amino acids transporter small subunit 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1O75387 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC43A1O75387 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC43A1O75387 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC43A1O75387 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC43A1O75387 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SLC43A1O75387 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC43A1O75387 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC43A1O75387 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC43A1O75387 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC43A1O75387 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC43A1O75387 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SLC43A1O75387 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC43A1O75387 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC43A1O75387 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC43A1O75387 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC43A1O75387 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC43A1O75387 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC43A1O75387 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC43A1O75387 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC43A1O75387 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC43A1O75387 RNF152P1-201ENST00000397754 604 ntBASIC16.3■□□□□ 0.2
SLC43A1O75387 RCN1P1-201ENST00000400413 996 ntBASIC16.3■□□□□ 0.2
SLC43A1O75387 AK4P3-201ENST00000418260 669 ntBASIC16.3■□□□□ 0.2
SLC43A1O75387 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC43A1O75387 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC43A1O75387 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC43A1O75387 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC43A1O75387 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC43A1O75387 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC43A1O75387 AL441883.1-201ENST00000566170 1045 ntBASIC16.3■□□□□ 0.2
SLC43A1O75387 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC43A1O75387 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC43A1O75387 AC011558.1-201ENST00000623459 338 ntBASIC16.3■□□□□ 0.2
SLC43A1O75387 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC43A1O75387 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC43A1O75387 AC135776.1-201ENST00000319817 2481 ntBASIC16.3■□□□□ 0.2
SLC43A1O75387 AC080080.1-201ENST00000625121 2420 ntBASIC16.3■□□□□ 0.2
SLC43A1O75387 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.3■□□□□ 0.2
SLC43A1O75387 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC43A1O75387 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC43A1O75387 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC43A1O75387 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC43A1O75387 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC43A1O75387 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC43A1O75387 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
SLC43A1O75387 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC43A1O75387 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC43A1O75387 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC43A1O75387 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC43A1O75387 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC43A1O75387 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC43A1O75387 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC43A1O75387 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC43A1O75387 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC43A1O75387 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC43A1O75387 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.29■□□□□ 0.2
SLC43A1O75387 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC43A1O75387 TMPOP1-202ENST00000424642 1267 ntBASIC16.29■□□□□ 0.2
SLC43A1O75387 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC43A1O75387 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC43A1O75387 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SLC43A1O75387 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
SLC43A1O75387 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.29■□□□□ 0.2
SLC43A1O75387 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.29■□□□□ 0.2
SLC43A1O75387 RN7SL850P-201ENST00000579959 291 ntBASIC16.29■□□□□ 0.2
SLC43A1O75387 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SLC43A1O75387 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SLC43A1O75387 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC43A1O75387 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC43A1O75387 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC43A1O75387 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC43A1O75387 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC43A1O75387 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC43A1O75387 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SLC43A1O75387 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC43A1O75387 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SLC43A1O75387 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC43A1O75387 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC43A1O75387 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SLC43A1O75387 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC43A1O75387 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC43A1O75387 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SLC43A1O75387 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SLC43A1O75387 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC43A1O75387 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC43A1O75387 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC43A1O75387 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC43A1O75387 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SLC43A1O75387 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC43A1O75387 TSPY5P-201ENST00000426936 936 ntBASIC16.28■□□□□ 0.2
SLC43A1O75387 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SLC43A1O75387 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.28■□□□□ 0.2
SLC43A1O75387 AC092647.4-201ENST00000457211 535 ntBASIC16.28■□□□□ 0.2
SLC43A1O75387 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.28■□□□□ 0.2
SLC43A1O75387 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.28■□□□□ 0.2
SLC43A1O75387 AL157888.1-201ENST00000631930 593 ntBASIC16.28■□□□□ 0.2
SLC43A1O75387 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC43A1O75387 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SLC43A1O75387 GMCL1P1-201ENST00000463439 1581 ntBASIC16.28■□□□□ 0.2
SLC43A1O75387 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms