Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCN2BO60939 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.04■□□□□ 0.32
SCN2BO60939 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
SCN2BO60939 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCN2BO60939 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCN2BO60939 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCN2BO60939 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SCN2BO60939 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SCN2BO60939 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SCN2BO60939 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCN2BO60939 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SCN2BO60939 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SCN2BO60939 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.04■□□□□ 0.32
SCN2BO60939 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SCN2BO60939 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.04■□□□□ 0.32
SCN2BO60939 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCN2BO60939 AL512604.3-201ENST00000569583 964 ntBASIC17.04■□□□□ 0.32
SCN2BO60939 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.04■□□□□ 0.32
SCN2BO60939 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
SCN2BO60939 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCN2BO60939 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCN2BO60939 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SCN2BO60939 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SCN2BO60939 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCN2BO60939 SIRPAP1-201ENST00000448467 1770 ntBASIC17.04■□□□□ 0.32
SCN2BO60939 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.04■□□□□ 0.32
SCN2BO60939 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCN2BO60939 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
SCN2BO60939 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCN2BO60939 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.04■□□□□ 0.32
SCN2BO60939 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SCN2BO60939 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCN2BO60939 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SCN2BO60939 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.04■□□□□ 0.32
SCN2BO60939 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SCN2BO60939 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SCN2BO60939 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCN2BO60939 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SCN2BO60939 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCN2BO60939 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCN2BO60939 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCN2BO60939 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCN2BO60939 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
SCN2BO60939 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SCN2BO60939 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCN2BO60939 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.03■□□□□ 0.32
SCN2BO60939 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.03■□□□□ 0.32
SCN2BO60939 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.03■□□□□ 0.32
SCN2BO60939 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.03■□□□□ 0.32
SCN2BO60939 ECEL1P3-201ENST00000427961 737 ntBASIC17.03■□□□□ 0.32
SCN2BO60939 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.03■□□□□ 0.32
SCN2BO60939 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.03■□□□□ 0.32
SCN2BO60939 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.03■□□□□ 0.32
SCN2BO60939 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.03■□□□□ 0.32
SCN2BO60939 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.03■□□□□ 0.32
SCN2BO60939 AL157888.1-201ENST00000631930 593 ntBASIC17.03■□□□□ 0.32
SCN2BO60939 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.03■□□□□ 0.32
SCN2BO60939 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.03■□□□□ 0.32
SCN2BO60939 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCN2BO60939 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCN2BO60939 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.03■□□□□ 0.32
SCN2BO60939 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.03■□□□□ 0.32
SCN2BO60939 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SCN2BO60939 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCN2BO60939 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCN2BO60939 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SCN2BO60939 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
SCN2BO60939 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.02■□□□□ 0.32
SCN2BO60939 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCN2BO60939 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCN2BO60939 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.02■□□□□ 0.32
SCN2BO60939 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SCN2BO60939 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SCN2BO60939 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCN2BO60939 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SCN2BO60939 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCN2BO60939 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.02■□□□□ 0.32
SCN2BO60939 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
SCN2BO60939 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.02■□□□□ 0.32
SCN2BO60939 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.02■□□□□ 0.32
SCN2BO60939 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SCN2BO60939 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SCN2BO60939 AC092865.7-201ENST00000641832 219 ntBASIC17.02■□□□□ 0.32
SCN2BO60939 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCN2BO60939 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.02■□□□□ 0.32
SCN2BO60939 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SCN2BO60939 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
SCN2BO60939 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.02■□□□□ 0.32
SCN2BO60939 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SCN2BO60939 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SCN2BO60939 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.02■□□□□ 0.31
SCN2BO60939 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
SCN2BO60939 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SCN2BO60939 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
SCN2BO60939 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCN2BO60939 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCN2BO60939 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SCN2BO60939 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SCN2BO60939 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SCN2BO60939 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms