Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CTNND1O60716 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTNND1O60716 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
CTNND1O60716 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.89■□□□□ 0.93
CTNND1O60716 KRT18P27-201ENST00000427733 1299 ntBASIC20.89■□□□□ 0.93
CTNND1O60716 AC103564.2-201ENST00000432853 1299 ntBASIC20.89■□□□□ 0.93
CTNND1O60716 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTNND1O60716 AC040169.1-201ENST00000565382 521 ntBASIC20.89■□□□□ 0.93
CTNND1O60716 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.89■□□□□ 0.93
CTNND1O60716 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CTNND1O60716 AC055717.3-201ENST00000622967 595 ntBASIC20.89■□□□□ 0.93
CTNND1O60716 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTNND1O60716 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CTNND1O60716 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTNND1O60716 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CTNND1O60716 AC126763.1-201ENST00000552015 2118 ntBASIC20.89■□□□□ 0.93
CTNND1O60716 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.88■□□□□ 0.93
CTNND1O60716 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTNND1O60716 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.88■□□□□ 0.93
CTNND1O60716 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.88■□□□□ 0.93
CTNND1O60716 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CTNND1O60716 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CTNND1O60716 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTNND1O60716 KRT8P47-201ENST00000604727 1398 ntBASIC20.88■□□□□ 0.93
CTNND1O60716 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTNND1O60716 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CTNND1O60716 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTNND1O60716 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTNND1O60716 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CTNND1O60716 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.88■□□□□ 0.93
CTNND1O60716 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.88■□□□□ 0.93
CTNND1O60716 AC009947.1-201ENST00000444350 727 ntBASIC20.88■□□□□ 0.93
CTNND1O60716 DUTP2-201ENST00000519164 463 ntBASIC20.88■□□□□ 0.93
CTNND1O60716 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CTNND1O60716 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CTNND1O60716 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTNND1O60716 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.88■□□□□ 0.93
CTNND1O60716 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTNND1O60716 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.88■□□□□ 0.93
CTNND1O60716 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.88■□□□□ 0.93
CTNND1O60716 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTNND1O60716 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.87■□□□□ 0.93
CTNND1O60716 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CTNND1O60716 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CTNND1O60716 PHGDH-209ENST00000641074 1780 ntBASIC20.87■□□□□ 0.93
CTNND1O60716 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTNND1O60716 AC098818.2-201ENST00000564925 2320 ntBASIC20.87■□□□□ 0.93
CTNND1O60716 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTNND1O60716 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.87■□□□□ 0.93
CTNND1O60716 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.87■□□□□ 0.93
CTNND1O60716 COX5BP2-201ENST00000392354 334 ntBASIC20.87■□□□□ 0.93
CTNND1O60716 RPSAP43-201ENST00000402237 625 ntBASIC20.87■□□□□ 0.93
CTNND1O60716 SPDYE21P-201ENST00000413323 827 ntBASIC20.87■□□□□ 0.93
CTNND1O60716 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.87■□□□□ 0.93
CTNND1O60716 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.87■□□□□ 0.93
CTNND1O60716 RNA5SP416-201ENST00000516838 111 ntBASIC20.87■□□□□ 0.93
CTNND1O60716 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.87■□□□□ 0.93
CTNND1O60716 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.87■□□□□ 0.93
CTNND1O60716 AC006557.2-201ENST00000592985 1240 ntBASIC20.87■□□□□ 0.93
CTNND1O60716 AL139424.1-201ENST00000607572 797 ntBASIC20.87■□□□□ 0.93
CTNND1O60716 AL691403.2-201ENST00000618460 490 ntBASIC20.87■□□□□ 0.93
CTNND1O60716 PGM5P2-202ENST00000637225 1043 ntBASIC20.87■□□□□ 0.93
CTNND1O60716 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTNND1O60716 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTNND1O60716 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.87■□□□□ 0.93
CTNND1O60716 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTNND1O60716 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTNND1O60716 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.87■□□□□ 0.93
CTNND1O60716 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.86■□□□□ 0.93
CTNND1O60716 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTNND1O60716 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.86■□□□□ 0.93
CTNND1O60716 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTNND1O60716 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTNND1O60716 AC022898.2-201ENST00000616822 1312 ntBASIC20.86■□□□□ 0.93
CTNND1O60716 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CTNND1O60716 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CTNND1O60716 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTNND1O60716 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.86■□□□□ 0.93
CTNND1O60716 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.86■□□□□ 0.93
CTNND1O60716 YBX2P1-201ENST00000394192 760 ntBASIC20.86■□□□□ 0.93
CTNND1O60716 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.86■□□□□ 0.93
CTNND1O60716 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.86■□□□□ 0.93
CTNND1O60716 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.86■□□□□ 0.93
CTNND1O60716 MIR1199-201ENST00000621445 119 ntBASIC20.86■□□□□ 0.93
CTNND1O60716 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTNND1O60716 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
CTNND1O60716 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
CTNND1O60716 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CTNND1O60716 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CTNND1O60716 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.86■□□□□ 0.93
CTNND1O60716 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CTNND1O60716 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTNND1O60716 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTNND1O60716 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTNND1O60716 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTNND1O60716 AC004817.3-201ENST00000602957 2129 ntBASIC20.86■□□□□ 0.93
CTNND1O60716 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CTNND1O60716 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
CTNND1O60716 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CTNND1O60716 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms