Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.13■□□□□ 0.81
ACTN4O43707 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.13■□□□□ 0.81
ACTN4O43707 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
ACTN4O43707 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.13■□□□□ 0.81
ACTN4O43707 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
ACTN4O43707 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ACTN4O43707 BCL2-203ENST00000589955 5011 ntBASIC20.13■□□□□ 0.81
ACTN4O43707 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ACTN4O43707 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ACTN4O43707 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ACTN4O43707 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.13■□□□□ 0.81
ACTN4O43707 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ACTN4O43707 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
ACTN4O43707 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.13■□□□□ 0.81
ACTN4O43707 LIN28AP1-201ENST00000429574 405 ntBASIC20.13■□□□□ 0.81
ACTN4O43707 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ACTN4O43707 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ACTN4O43707 KRT18P65-201ENST00000439811 1286 ntBASIC20.13■□□□□ 0.81
ACTN4O43707 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.13■□□□□ 0.81
ACTN4O43707 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.13■□□□□ 0.81
ACTN4O43707 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.13■□□□□ 0.81
ACTN4O43707 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.13■□□□□ 0.81
ACTN4O43707 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.13■□□□□ 0.81
ACTN4O43707 AC139887.4-201ENST00000607877 719 ntBASIC20.13■□□□□ 0.81
ACTN4O43707 AC073912.3-201ENST00000624414 853 ntBASIC20.13■□□□□ 0.81
ACTN4O43707 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
ACTN4O43707 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ACTN4O43707 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ACTN4O43707 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
ACTN4O43707 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.13■□□□□ 0.81
ACTN4O43707 LINC00304-203ENST00000565008 1864 ntBASIC20.13■□□□□ 0.81
ACTN4O43707 SIRPAP1-201ENST00000448467 1770 ntBASIC20.13■□□□□ 0.81
ACTN4O43707 AC133963.1-201ENST00000504166 1679 ntBASIC20.13■□□□□ 0.81
ACTN4O43707 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
ACTN4O43707 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.12■□□□□ 0.81
ACTN4O43707 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ACTN4O43707 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.12■□□□□ 0.81
ACTN4O43707 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
ACTN4O43707 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ACTN4O43707 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ACTN4O43707 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ACTN4O43707 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ACTN4O43707 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ACTN4O43707 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.12■□□□□ 0.81
ACTN4O43707 STARP1-201ENST00000397973 869 ntBASIC20.12■□□□□ 0.81
ACTN4O43707 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.12■□□□□ 0.81
ACTN4O43707 ATP5G1P1-201ENST00000448724 379 ntBASIC20.12■□□□□ 0.81
ACTN4O43707 AC092597.1-201ENST00000487352 616 ntBASIC20.12■□□□□ 0.81
ACTN4O43707 YBX1P2-201ENST00000489612 999 ntBASIC20.12■□□□□ 0.81
ACTN4O43707 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ACTN4O43707 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.12■□□□□ 0.81
ACTN4O43707 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.12■□□□□ 0.81
ACTN4O43707 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ACTN4O43707 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ACTN4O43707 AL031432.5-201ENST00000641059 760 ntBASIC20.12■□□□□ 0.81
ACTN4O43707 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.12■□□□□ 0.81
ACTN4O43707 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ACTN4O43707 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
ACTN4O43707 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ACTN4O43707 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
ACTN4O43707 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
ACTN4O43707 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
ACTN4O43707 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ACTN4O43707 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ACTN4O43707 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ACTN4O43707 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
ACTN4O43707 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ACTN4O43707 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
ACTN4O43707 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.11■□□□□ 0.81
ACTN4O43707 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
ACTN4O43707 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.11■□□□□ 0.81
ACTN4O43707 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
ACTN4O43707 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.11■□□□□ 0.81
ACTN4O43707 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
ACTN4O43707 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ACTN4O43707 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.11■□□□□ 0.81
ACTN4O43707 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.11■□□□□ 0.81
ACTN4O43707 AC117947.1-201ENST00000427448 529 ntBASIC20.11■□□□□ 0.81
ACTN4O43707 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.11■□□□□ 0.81
ACTN4O43707 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ACTN4O43707 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ACTN4O43707 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.11■□□□□ 0.81
ACTN4O43707 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.11■□□□□ 0.81
ACTN4O43707 AC004263.2-201ENST00000617183 678 ntBASIC20.11■□□□□ 0.81
ACTN4O43707 AC005363.2-201ENST00000618631 242 ntBASIC20.11■□□□□ 0.81
ACTN4O43707 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.11■□□□□ 0.81
ACTN4O43707 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ACTN4O43707 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ACTN4O43707 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ACTN4O43707 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ACTN4O43707 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
ACTN4O43707 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ACTN4O43707 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.11■□□□□ 0.81
ACTN4O43707 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
ACTN4O43707 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ACTN4O43707 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
ACTN4O43707 FZD10-202ENST00000539839 3282 ntBASIC20.1■□□□□ 0.81
ACTN4O43707 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ACTN4O43707 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ACTN4O43707 REXO1L11P-201ENST00000620964 1927 ntBASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms