Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.13■□□□□ 0.65
HOXA2O43364 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HOXA2O43364 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HOXA2O43364 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.13■□□□□ 0.65
HOXA2O43364 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.13■□□□□ 0.65
HOXA2O43364 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.13■□□□□ 0.65
HOXA2O43364 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HOXA2O43364 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HOXA2O43364 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
HOXA2O43364 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
HOXA2O43364 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
HOXA2O43364 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HOXA2O43364 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
HOXA2O43364 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HOXA2O43364 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HOXA2O43364 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HOXA2O43364 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
HOXA2O43364 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.12■□□□□ 0.65
HOXA2O43364 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HOXA2O43364 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.12■□□□□ 0.65
HOXA2O43364 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HOXA2O43364 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.12■□□□□ 0.65
HOXA2O43364 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HOXA2O43364 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
HOXA2O43364 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HOXA2O43364 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.12■□□□□ 0.65
HOXA2O43364 AC005104.2-201ENST00000427818 678 ntBASIC19.12■□□□□ 0.65
HOXA2O43364 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.12■□□□□ 0.65
HOXA2O43364 AC136632.2-201ENST00000512891 861 ntBASIC19.12■□□□□ 0.65
HOXA2O43364 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.12■□□□□ 0.65
HOXA2O43364 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HOXA2O43364 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.12■□□□□ 0.65
HOXA2O43364 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.12■□□□□ 0.65
HOXA2O43364 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.12■□□□□ 0.65
HOXA2O43364 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HOXA2O43364 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HOXA2O43364 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
HOXA2O43364 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HOXA2O43364 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.12■□□□□ 0.65
HOXA2O43364 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HOXA2O43364 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.11■□□□□ 0.65
HOXA2O43364 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HOXA2O43364 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
HOXA2O43364 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HOXA2O43364 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HOXA2O43364 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HOXA2O43364 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.11■□□□□ 0.65
HOXA2O43364 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HOXA2O43364 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HOXA2O43364 UPF3AP3-201ENST00000420996 769 ntBASIC19.11■□□□□ 0.65
HOXA2O43364 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.11■□□□□ 0.65
HOXA2O43364 AC009947.1-201ENST00000444350 727 ntBASIC19.11■□□□□ 0.65
HOXA2O43364 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.11■□□□□ 0.65
HOXA2O43364 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.11■□□□□ 0.65
HOXA2O43364 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.11■□□□□ 0.65
HOXA2O43364 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.11■□□□□ 0.65
HOXA2O43364 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.11■□□□□ 0.65
HOXA2O43364 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.11■□□□□ 0.65
HOXA2O43364 AC116407.2-201ENST00000613639 860 ntBASIC19.11■□□□□ 0.65
HOXA2O43364 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HOXA2O43364 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HOXA2O43364 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HOXA2O43364 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HOXA2O43364 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.11■□□□□ 0.65
HOXA2O43364 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HOXA2O43364 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
HOXA2O43364 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HOXA2O43364 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
HOXA2O43364 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXA2O43364 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
HOXA2O43364 AL353593.2-201ENST00000602529 1483 ntBASIC19.1■□□□□ 0.65
HOXA2O43364 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.1■□□□□ 0.65
HOXA2O43364 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.1■□□□□ 0.65
HOXA2O43364 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HOXA2O43364 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXA2O43364 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HOXA2O43364 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.1■□□□□ 0.65
HOXA2O43364 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.1■□□□□ 0.65
HOXA2O43364 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.1■□□□□ 0.65
HOXA2O43364 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.1■□□□□ 0.65
HOXA2O43364 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.1■□□□□ 0.65
HOXA2O43364 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HOXA2O43364 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.1■□□□□ 0.65
HOXA2O43364 MIR3687-2-201ENST00000577708 61 ntBASIC19.1■□□□□ 0.65
HOXA2O43364 MIR3687-1-201ENST00000614492 61 ntBASIC19.1■□□□□ 0.65
HOXA2O43364 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.1■□□□□ 0.65
HOXA2O43364 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
HOXA2O43364 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXA2O43364 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HOXA2O43364 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
HOXA2O43364 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXA2O43364 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
HOXA2O43364 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
HOXA2O43364 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
HOXA2O43364 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXA2O43364 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
HOXA2O43364 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXA2O43364 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXA2O43364 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HOXA2O43364 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms