Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRANK1O15050 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.73■□□□□ 0.59
TRANK1O15050 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.72■□□□□ 0.59
TRANK1O15050 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRANK1O15050 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.72■□□□□ 0.59
TRANK1O15050 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRANK1O15050 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRANK1O15050 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.72■□□□□ 0.59
TRANK1O15050 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TRANK1O15050 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRANK1O15050 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.72■□□□□ 0.59
TRANK1O15050 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.72■□□□□ 0.59
TRANK1O15050 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRANK1O15050 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.72■□□□□ 0.59
TRANK1O15050 BCAR1-209ENST00000546196 1340 ntBASIC18.72■□□□□ 0.59
TRANK1O15050 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRANK1O15050 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
TRANK1O15050 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRANK1O15050 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.71■□□□□ 0.59
TRANK1O15050 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TRANK1O15050 AC018445.3-201ENST00000624177 1945 ntBASIC18.71■□□□□ 0.59
TRANK1O15050 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.71■□□□□ 0.59
TRANK1O15050 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.71■□□□□ 0.59
TRANK1O15050 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRANK1O15050 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.71■□□□□ 0.59
TRANK1O15050 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.71■□□□□ 0.59
TRANK1O15050 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TRANK1O15050 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRANK1O15050 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
TRANK1O15050 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.71■□□□□ 0.59
TRANK1O15050 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
TRANK1O15050 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.71■□□□□ 0.59
TRANK1O15050 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TRANK1O15050 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRANK1O15050 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRANK1O15050 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.71■□□□□ 0.59
TRANK1O15050 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.71■□□□□ 0.59
TRANK1O15050 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRANK1O15050 AP005018.1-201ENST00000525475 301 ntBASIC18.71■□□□□ 0.59
TRANK1O15050 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.71■□□□□ 0.59
TRANK1O15050 AC009093.7-201ENST00000623853 1223 ntBASIC18.71■□□□□ 0.59
TRANK1O15050 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRANK1O15050 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.71■□□□□ 0.59
TRANK1O15050 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRANK1O15050 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRANK1O15050 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.71■□□□□ 0.59
TRANK1O15050 AL121761.2-201ENST00000598007 1648 ntBASIC18.7■□□□□ 0.58
TRANK1O15050 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.7■□□□□ 0.58
TRANK1O15050 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRANK1O15050 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.7■□□□□ 0.58
TRANK1O15050 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.7■□□□□ 0.58
TRANK1O15050 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRANK1O15050 AC069262.1-201ENST00000539058 672 ntBASIC18.7■□□□□ 0.58
TRANK1O15050 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRANK1O15050 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRANK1O15050 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TRANK1O15050 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TRANK1O15050 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.7■□□□□ 0.58
TRANK1O15050 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRANK1O15050 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRANK1O15050 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.7■□□□□ 0.58
TRANK1O15050 FAM58CP-201ENST00000435741 640 ntBASIC18.7■□□□□ 0.58
TRANK1O15050 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.7■□□□□ 0.58
TRANK1O15050 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.7■□□□□ 0.58
TRANK1O15050 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRANK1O15050 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TRANK1O15050 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRANK1O15050 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRANK1O15050 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRANK1O15050 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.7■□□□□ 0.58
TRANK1O15050 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRANK1O15050 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.7■□□□□ 0.58
TRANK1O15050 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TRANK1O15050 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRANK1O15050 PMS2P4-201ENST00000412466 1052 ntBASIC18.7■□□□□ 0.58
TRANK1O15050 AL627223.1-201ENST00000416693 442 ntBASIC18.7■□□□□ 0.58
TRANK1O15050 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.7■□□□□ 0.58
TRANK1O15050 HLA-V-201ENST00000429037 534 ntBASIC18.7■□□□□ 0.58
TRANK1O15050 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.7■□□□□ 0.58
TRANK1O15050 AC073592.5-201ENST00000624854 528 ntBASIC18.7■□□□□ 0.58
TRANK1O15050 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRANK1O15050 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRANK1O15050 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.69■□□□□ 0.58
TRANK1O15050 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TRANK1O15050 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRANK1O15050 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRANK1O15050 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.69■□□□□ 0.58
TRANK1O15050 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRANK1O15050 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRANK1O15050 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRANK1O15050 AC099522.2-201ENST00000607001 744 ntBASIC18.69■□□□□ 0.58
TRANK1O15050 AC008761.3-201ENST00000624803 892 ntBASIC18.69■□□□□ 0.58
TRANK1O15050 AC025580.3-201ENST00000617932 1424 ntBASIC18.69■□□□□ 0.58
TRANK1O15050 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.69■□□□□ 0.58
TRANK1O15050 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRANK1O15050 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRANK1O15050 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRANK1O15050 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRANK1O15050 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRANK1O15050 AL353135.1-201ENST00000606729 504 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms