Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.13■□□□□ 0.33
PDLIM1O00151 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM1O00151 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM1O00151 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM1O00151 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM1O00151 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
PDLIM1O00151 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.13■□□□□ 0.33
PDLIM1O00151 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.13■□□□□ 0.33
PDLIM1O00151 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM1O00151 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.13■□□□□ 0.33
PDLIM1O00151 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.13■□□□□ 0.33
PDLIM1O00151 MIR4497-201ENST00000583208 89 ntBASIC17.13■□□□□ 0.33
PDLIM1O00151 AL445675.2-201ENST00000620291 557 ntBASIC17.13■□□□□ 0.33
PDLIM1O00151 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.13■□□□□ 0.33
PDLIM1O00151 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM1O00151 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM1O00151 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM1O00151 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PDLIM1O00151 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.13■□□□□ 0.33
PDLIM1O00151 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM1O00151 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM1O00151 AL023806.1-201ENST00000603994 1649 ntBASIC17.13■□□□□ 0.33
PDLIM1O00151 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDLIM1O00151 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.13■□□□□ 0.33
PDLIM1O00151 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
PDLIM1O00151 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PDLIM1O00151 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM1O00151 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PDLIM1O00151 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PDLIM1O00151 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.12■□□□□ 0.33
PDLIM1O00151 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM1O00151 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM1O00151 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM1O00151 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PDLIM1O00151 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PDLIM1O00151 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.12■□□□□ 0.33
PDLIM1O00151 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM1O00151 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM1O00151 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM1O00151 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM1O00151 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM1O00151 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.12■□□□□ 0.33
PDLIM1O00151 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.12■□□□□ 0.33
PDLIM1O00151 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM1O00151 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.12■□□□□ 0.33
PDLIM1O00151 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM1O00151 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.12■□□□□ 0.33
PDLIM1O00151 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM1O00151 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.12■□□□□ 0.33
PDLIM1O00151 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM1O00151 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM1O00151 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM1O00151 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PDLIM1O00151 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.12■□□□□ 0.33
PDLIM1O00151 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM1O00151 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.12■□□□□ 0.33
PDLIM1O00151 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM1O00151 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.12■□□□□ 0.33
PDLIM1O00151 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM1O00151 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM1O00151 UBALD1-205ENST00000590891 2641 ntBASIC17.12■□□□□ 0.33
PDLIM1O00151 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PDLIM1O00151 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PDLIM1O00151 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDLIM1O00151 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM1O00151 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM1O00151 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PDLIM1O00151 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM1O00151 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM1O00151 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM1O00151 LINC00602-201ENST00000629776 2065 ntBASIC17.11■□□□□ 0.33
PDLIM1O00151 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PDLIM1O00151 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM1O00151 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PDLIM1O00151 LINC00554-201ENST00000564841 3011 ntBASIC17.11■□□□□ 0.33
PDLIM1O00151 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM1O00151 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PDLIM1O00151 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.11■□□□□ 0.33
PDLIM1O00151 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PDLIM1O00151 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM1O00151 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM1O00151 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
PDLIM1O00151 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.11■□□□□ 0.33
PDLIM1O00151 SNORA78-201ENST00000459373 127 ntBASIC17.11■□□□□ 0.33
PDLIM1O00151 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.11■□□□□ 0.33
PDLIM1O00151 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.11■□□□□ 0.33
PDLIM1O00151 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.11■□□□□ 0.33
PDLIM1O00151 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
PDLIM1O00151 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.11■□□□□ 0.33
PDLIM1O00151 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.11■□□□□ 0.33
PDLIM1O00151 CD177P1-201ENST00000606252 935 ntBASIC17.11■□□□□ 0.33
PDLIM1O00151 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.11■□□□□ 0.33
PDLIM1O00151 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM1O00151 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM1O00151 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM1O00151 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM1O00151 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM1O00151 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM1O00151 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDLIM1O00151 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms