Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC188H7C350 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC188H7C350 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CCDC188H7C350 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC188H7C350 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC188H7C350 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC188H7C350 AP003041.3-201ENST00000527151 707 ntBASIC18.67■□□□□ 0.58
CCDC188H7C350 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.67■□□□□ 0.58
CCDC188H7C350 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC188H7C350 AC008687.5-201ENST00000593746 558 ntBASIC18.67■□□□□ 0.58
CCDC188H7C350 AC116407.2-201ENST00000613639 860 ntBASIC18.67■□□□□ 0.58
CCDC188H7C350 AL023803.3-201ENST00000615559 522 ntBASIC18.67■□□□□ 0.58
CCDC188H7C350 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC188H7C350 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC188H7C350 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC188H7C350 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC188H7C350 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC188H7C350 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCDC188H7C350 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC188H7C350 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC188H7C350 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC188H7C350 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
CCDC188H7C350 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC188H7C350 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.67■□□□□ 0.58
CCDC188H7C350 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC188H7C350 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC188H7C350 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC188H7C350 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC188H7C350 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC188H7C350 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC188H7C350 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC188H7C350 TNRC18P3-201ENST00000441896 2691 ntBASIC18.66■□□□□ 0.58
CCDC188H7C350 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC188H7C350 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC188H7C350 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCDC188H7C350 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC188H7C350 TSPY17P-201ENST00000450329 467 ntBASIC18.66■□□□□ 0.58
CCDC188H7C350 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC188H7C350 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC188H7C350 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC188H7C350 AP005242.2-201ENST00000580065 1175 ntBASIC18.66■□□□□ 0.58
CCDC188H7C350 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC188H7C350 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC188H7C350 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCDC188H7C350 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC188H7C350 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC188H7C350 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC188H7C350 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC188H7C350 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC188H7C350 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC188H7C350 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC188H7C350 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCDC188H7C350 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC188H7C350 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC188H7C350 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC188H7C350 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC188H7C350 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC188H7C350 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC188H7C350 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC188H7C350 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC188H7C350 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCDC188H7C350 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCDC188H7C350 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC188H7C350 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC188H7C350 PKD1P1-201ENST00000458669 6805 ntBASIC18.65■□□□□ 0.58
CCDC188H7C350 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC188H7C350 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CCDC188H7C350 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC188H7C350 SLC25A1P2-201ENST00000430693 912 ntBASIC18.65■□□□□ 0.58
CCDC188H7C350 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC188H7C350 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC188H7C350 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC188H7C350 AL353719.1-201ENST00000566847 864 ntBASIC18.65■□□□□ 0.58
CCDC188H7C350 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC188H7C350 AC010240.3-201ENST00000607688 395 ntBASIC18.65■□□□□ 0.58
CCDC188H7C350 FAM197Y4-202ENST00000622692 608 ntBASIC18.65■□□□□ 0.58
CCDC188H7C350 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC188H7C350 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC188H7C350 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC188H7C350 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC188H7C350 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC188H7C350 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC188H7C350 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CCDC188H7C350 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC188H7C350 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC188H7C350 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC188H7C350 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC188H7C350 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC188H7C350 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC188H7C350 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC188H7C350 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
CCDC188H7C350 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.64■□□□□ 0.58
CCDC188H7C350 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC188H7C350 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC188H7C350 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC188H7C350 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC188H7C350 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CCDC188H7C350 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC188H7C350 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC188H7C350 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms