Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP99D6REC4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CFAP99D6REC4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP99D6REC4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP99D6REC4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CFAP99D6REC4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP99D6REC4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.91■□□□□ 0.46
CFAP99D6REC4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.91■□□□□ 0.46
CFAP99D6REC4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.91■□□□□ 0.46
CFAP99D6REC4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP99D6REC4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP99D6REC4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP99D6REC4 AC120057.1-201ENST00000483947 663 ntBASIC17.91■□□□□ 0.46
CFAP99D6REC4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.91■□□□□ 0.46
CFAP99D6REC4 AC005332.3-201ENST00000589904 676 ntBASIC17.91■□□□□ 0.46
CFAP99D6REC4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.91■□□□□ 0.46
CFAP99D6REC4 AL445228.2-201ENST00000605589 952 ntBASIC17.91■□□□□ 0.46
CFAP99D6REC4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.91■□□□□ 0.46
CFAP99D6REC4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP99D6REC4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.91■□□□□ 0.46
CFAP99D6REC4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP99D6REC4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.91■□□□□ 0.46
CFAP99D6REC4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP99D6REC4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP99D6REC4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP99D6REC4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP99D6REC4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CFAP99D6REC4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.91■□□□□ 0.46
CFAP99D6REC4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CFAP99D6REC4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.91■□□□□ 0.46
CFAP99D6REC4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP99D6REC4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP99D6REC4 LINC00602-201ENST00000629776 2065 ntBASIC17.91■□□□□ 0.46
CFAP99D6REC4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CFAP99D6REC4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP99D6REC4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP99D6REC4 AL354751.1-201ENST00000412768 1863 ntBASIC17.9■□□□□ 0.46
CFAP99D6REC4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.9■□□□□ 0.46
CFAP99D6REC4 REXO1L9P-201ENST00000604264 2108 ntBASIC17.9■□□□□ 0.46
CFAP99D6REC4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CFAP99D6REC4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CFAP99D6REC4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP99D6REC4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CFAP99D6REC4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.9■□□□□ 0.46
CFAP99D6REC4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP99D6REC4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP99D6REC4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.9■□□□□ 0.46
CFAP99D6REC4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CFAP99D6REC4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP99D6REC4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP99D6REC4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP99D6REC4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP99D6REC4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
CFAP99D6REC4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.9■□□□□ 0.46
CFAP99D6REC4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP99D6REC4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP99D6REC4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.9■□□□□ 0.46
CFAP99D6REC4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.9■□□□□ 0.46
CFAP99D6REC4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CFAP99D6REC4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.9■□□□□ 0.46
CFAP99D6REC4 AC004263.2-201ENST00000617183 678 ntBASIC17.9■□□□□ 0.46
CFAP99D6REC4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.9■□□□□ 0.46
CFAP99D6REC4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP99D6REC4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP99D6REC4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP99D6REC4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP99D6REC4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CFAP99D6REC4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP99D6REC4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP99D6REC4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP99D6REC4 AL353692.3-201ENST00000407031 1396 ntBASIC17.9■□□□□ 0.46
CFAP99D6REC4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP99D6REC4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.9■□□□□ 0.46
CFAP99D6REC4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.9■□□□□ 0.46
CFAP99D6REC4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP99D6REC4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP99D6REC4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CFAP99D6REC4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CFAP99D6REC4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CFAP99D6REC4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CFAP99D6REC4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CFAP99D6REC4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CFAP99D6REC4 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CFAP99D6REC4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CFAP99D6REC4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.89■□□□□ 0.46
CFAP99D6REC4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CFAP99D6REC4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CFAP99D6REC4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CFAP99D6REC4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CFAP99D6REC4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.89■□□□□ 0.45
CFAP99D6REC4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CFAP99D6REC4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.89■□□□□ 0.45
CFAP99D6REC4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CFAP99D6REC4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CFAP99D6REC4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.89■□□□□ 0.45
CFAP99D6REC4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
CFAP99D6REC4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CFAP99D6REC4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CFAP99D6REC4 TSPY12P-201ENST00000421279 868 ntBASIC17.89■□□□□ 0.45
CFAP99D6REC4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms