Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.71■□□□□ 0.11
MBD3L3A6NE82 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.71■□□□□ 0.11
MBD3L3A6NE82 AC008735.5-201ENST00000623544 497 ntBASIC15.71■□□□□ 0.11
MBD3L3A6NE82 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.71■□□□□ 0.11
MBD3L3A6NE82 AL022326.1-202ENST00000641533 845 ntBASIC15.71■□□□□ 0.11
MBD3L3A6NE82 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MBD3L3A6NE82 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
MBD3L3A6NE82 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MBD3L3A6NE82 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.71■□□□□ 0.11
MBD3L3A6NE82 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MBD3L3A6NE82 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.71■□□□□ 0.11
MBD3L3A6NE82 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
MBD3L3A6NE82 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MBD3L3A6NE82 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MBD3L3A6NE82 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
MBD3L3A6NE82 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
MBD3L3A6NE82 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
MBD3L3A6NE82 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
MBD3L3A6NE82 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.7■□□□□ 0.1
MBD3L3A6NE82 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 LAGE3P1-201ENST00000425356 484 ntBASIC15.7■□□□□ 0.1
MBD3L3A6NE82 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 PRYP5-201ENST00000451909 266 ntBASIC15.7■□□□□ 0.1
MBD3L3A6NE82 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 RPL13AP23-201ENST00000480739 586 ntBASIC15.7■□□□□ 0.1
MBD3L3A6NE82 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 KRT18P58-201ENST00000527480 1120 ntBASIC15.7■□□□□ 0.1
MBD3L3A6NE82 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 AC023511.2-201ENST00000618803 211 ntBASIC15.7■□□□□ 0.1
MBD3L3A6NE82 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 AL353593.2-201ENST00000602529 1483 ntBASIC15.7■□□□□ 0.1
MBD3L3A6NE82 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.7■□□□□ 0.1
MBD3L3A6NE82 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 SPDYE21P-201ENST00000413323 827 ntBASIC15.69■□□□□ 0.1
MBD3L3A6NE82 DDX43P3-201ENST00000441064 443 ntBASIC15.69■□□□□ 0.1
MBD3L3A6NE82 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 IGHV3-22-201ENST00000520721 359 ntBASIC15.69■□□□□ 0.1
MBD3L3A6NE82 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 AC073592.5-201ENST00000624854 528 ntBASIC15.69■□□□□ 0.1
MBD3L3A6NE82 AC117500.6-201ENST00000624871 588 ntBASIC15.69■□□□□ 0.1
MBD3L3A6NE82 ZNF259P1-201ENST00000407656 1365 ntBASIC15.69■□□□□ 0.1
MBD3L3A6NE82 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
MBD3L3A6NE82 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms