Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM49BA6NDI0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM49BA6NDI0 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
TRIM49BA6NDI0 AC009949.1-201ENST00000623048 1830 ntBASIC19.79■□□□□ 0.76
TRIM49BA6NDI0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.79■□□□□ 0.76
TRIM49BA6NDI0 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM49BA6NDI0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM49BA6NDI0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.78■□□□□ 0.76
TRIM49BA6NDI0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
TRIM49BA6NDI0 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM49BA6NDI0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM49BA6NDI0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM49BA6NDI0 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM49BA6NDI0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM49BA6NDI0 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM49BA6NDI0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM49BA6NDI0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM49BA6NDI0 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM49BA6NDI0 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM49BA6NDI0 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM49BA6NDI0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM49BA6NDI0 AC005521.1-201ENST00000393351 872 ntBASIC19.78■□□□□ 0.76
TRIM49BA6NDI0 KRT18P57-201ENST00000443599 1254 ntBASIC19.78■□□□□ 0.76
TRIM49BA6NDI0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.78■□□□□ 0.76
TRIM49BA6NDI0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.78■□□□□ 0.76
TRIM49BA6NDI0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM49BA6NDI0 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM49BA6NDI0 AC008687.5-201ENST00000593746 558 ntBASIC19.78■□□□□ 0.76
TRIM49BA6NDI0 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
TRIM49BA6NDI0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
TRIM49BA6NDI0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
TRIM49BA6NDI0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM49BA6NDI0 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
TRIM49BA6NDI0 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM49BA6NDI0 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
TRIM49BA6NDI0 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM49BA6NDI0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM49BA6NDI0 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
TRIM49BA6NDI0 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM49BA6NDI0 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.77■□□□□ 0.76
TRIM49BA6NDI0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM49BA6NDI0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
TRIM49BA6NDI0 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM49BA6NDI0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
TRIM49BA6NDI0 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM49BA6NDI0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM49BA6NDI0 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM49BA6NDI0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM49BA6NDI0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.77■□□□□ 0.76
TRIM49BA6NDI0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.77■□□□□ 0.76
TRIM49BA6NDI0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.77■□□□□ 0.76
TRIM49BA6NDI0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.77■□□□□ 0.76
TRIM49BA6NDI0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM49BA6NDI0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.77■□□□□ 0.76
TRIM49BA6NDI0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.77■□□□□ 0.76
TRIM49BA6NDI0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.77■□□□□ 0.76
TRIM49BA6NDI0 KRT8P47-201ENST00000604727 1398 ntBASIC19.77■□□□□ 0.76
TRIM49BA6NDI0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
TRIM49BA6NDI0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM49BA6NDI0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM49BA6NDI0 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
TRIM49BA6NDI0 HTR7P1-202ENST00000624664 4411 ntBASIC19.77■□□□□ 0.75
TRIM49BA6NDI0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
TRIM49BA6NDI0 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 HLA-F-220ENST00000434407 884 ntBASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 KRT18P38-201ENST00000449496 1282 ntBASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 AC004263.2-201ENST00000617183 678 ntBASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM49BA6NDI0 AC022898.2-201ENST00000616822 1312 ntBASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms