Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 AL671277.2-201ENST00000458060 996 ntBASIC17.97■□□□□ 0.47
CCDC162PA2VCL2 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC162PA2VCL2 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.97■□□□□ 0.47
CCDC162PA2VCL2 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC162PA2VCL2 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC162PA2VCL2 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC162PA2VCL2 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC162PA2VCL2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CCDC162PA2VCL2 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC162PA2VCL2 GNAS-203ENST00000306120 1878 ntBASIC17.97■□□□□ 0.47
CCDC162PA2VCL2 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CCDC162PA2VCL2 AC022898.2-201ENST00000616822 1312 ntBASIC17.97■□□□□ 0.47
CCDC162PA2VCL2 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 KRT18P65-201ENST00000439811 1286 ntBASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.96■□□□□ 0.47
CCDC162PA2VCL2 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
CCDC162PA2VCL2 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 HTR7P1-202ENST00000624664 4411 ntBASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 LINC01238-205ENST00000567549 1107 ntBASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 RNF126P1-202ENST00000569893 925 ntBASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC162PA2VCL2 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 FAM210CP-201ENST00000445714 574 ntBASIC17.94■□□□□ 0.46
CCDC162PA2VCL2 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms