Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 RPS29-206ENST00000557111 488 ntTSL 2 BASIC25.66■■□□□ 1.7
CCDC144AA2RUR9 SDCCAG3P1-201ENST00000589292 1150 ntBASIC25.66■■□□□ 1.7
CCDC144AA2RUR9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CCDC144AA2RUR9 MADD-208ENST00000405573 1823 ntTSL 5 BASIC25.66■■□□□ 1.7
CCDC144AA2RUR9 AC009949.1-201ENST00000623048 1830 ntBASIC25.66■■□□□ 1.7
CCDC144AA2RUR9 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC25.66■■□□□ 1.7
CCDC144AA2RUR9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CCDC144AA2RUR9 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
CCDC144AA2RUR9 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
CCDC144AA2RUR9 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC25.66■■□□□ 1.7
CCDC144AA2RUR9 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC25.66■■□□□ 1.7
CCDC144AA2RUR9 REXO1L9P-201ENST00000604264 2108 ntBASIC25.66■■□□□ 1.7
CCDC144AA2RUR9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
CCDC144AA2RUR9 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC144AA2RUR9 AP002414.3-201ENST00000589352 1468 ntBASIC25.65■■□□□ 1.7
CCDC144AA2RUR9 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC144AA2RUR9 AC132938.5-201ENST00000624980 1813 ntBASIC25.65■■□□□ 1.7
CCDC144AA2RUR9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC144AA2RUR9 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC25.65■■□□□ 1.7
CCDC144AA2RUR9 KRT18P27-201ENST00000427733 1299 ntBASIC25.65■■□□□ 1.7
CCDC144AA2RUR9 DDX43P3-201ENST00000441064 443 ntBASIC25.65■■□□□ 1.7
CCDC144AA2RUR9 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC25.65■■□□□ 1.7
CCDC144AA2RUR9 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC25.65■■□□□ 1.7
CCDC144AA2RUR9 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC144AA2RUR9 AC148477.5-201ENST00000625164 1645 ntBASIC25.65■■□□□ 1.7
CCDC144AA2RUR9 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC25.65■■□□□ 1.7
CCDC144AA2RUR9 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC144AA2RUR9 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC144AA2RUR9 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC25.65■■□□□ 1.7
CCDC144AA2RUR9 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC144AA2RUR9 AC104109.2-201ENST00000602919 1418 ntBASIC25.65■■□□□ 1.7
CCDC144AA2RUR9 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC144AA2RUR9 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CCDC144AA2RUR9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
CCDC144AA2RUR9 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
CCDC144AA2RUR9 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CCDC144AA2RUR9 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC25.64■■□□□ 1.7
CCDC144AA2RUR9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CCDC144AA2RUR9 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC25.64■■□□□ 1.7
CCDC144AA2RUR9 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
CCDC144AA2RUR9 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
CCDC144AA2RUR9 KRT18P13-201ENST00000400056 1290 ntBASIC25.64■■□□□ 1.7
CCDC144AA2RUR9 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC25.64■■□□□ 1.7
CCDC144AA2RUR9 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC25.64■■□□□ 1.7
CCDC144AA2RUR9 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC25.64■■□□□ 1.7
CCDC144AA2RUR9 POLD2P1-201ENST00000511220 997 ntBASIC25.64■■□□□ 1.7
CCDC144AA2RUR9 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC25.64■■□□□ 1.7
CCDC144AA2RUR9 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
CCDC144AA2RUR9 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CCDC144AA2RUR9 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC25.64■■□□□ 1.7
CCDC144AA2RUR9 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CCDC144AA2RUR9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CCDC144AA2RUR9 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CCDC144AA2RUR9 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC25.64■■□□□ 1.69
CCDC144AA2RUR9 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CCDC144AA2RUR9 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CCDC144AA2RUR9 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC25.64■■□□□ 1.69
CCDC144AA2RUR9 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CCDC144AA2RUR9 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CCDC144AA2RUR9 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC25.64■■□□□ 1.69
CCDC144AA2RUR9 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC25.64■■□□□ 1.69
CCDC144AA2RUR9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.69
CCDC144AA2RUR9 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC25.63■■□□□ 1.69
CCDC144AA2RUR9 CENPM-204ENST00000402420 688 ntTSL 5 BASIC25.63■■□□□ 1.69
CCDC144AA2RUR9 KLF4P1-201ENST00000412782 1185 ntBASIC25.63■■□□□ 1.69
CCDC144AA2RUR9 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC25.63■■□□□ 1.69
CCDC144AA2RUR9 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
CCDC144AA2RUR9 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC25.63■■□□□ 1.69
CCDC144AA2RUR9 AC034105.1-201ENST00000563488 319 ntBASIC25.63■■□□□ 1.69
CCDC144AA2RUR9 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC25.63■■□□□ 1.69
CCDC144AA2RUR9 AC090164.3-201ENST00000610780 2143 ntBASIC25.63■■□□□ 1.69
CCDC144AA2RUR9 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC25.63■■□□□ 1.69
CCDC144AA2RUR9 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC144AA2RUR9 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC144AA2RUR9 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC144AA2RUR9 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC144AA2RUR9 AC004817.3-201ENST00000602957 2129 ntBASIC25.63■■□□□ 1.69
CCDC144AA2RUR9 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC25.63■■□□□ 1.69
CCDC144AA2RUR9 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC25.63■■□□□ 1.69
CCDC144AA2RUR9 ZNF259P1-201ENST00000407656 1365 ntBASIC25.63■■□□□ 1.69
CCDC144AA2RUR9 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC144AA2RUR9 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC144AA2RUR9 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC25.63■■□□□ 1.69
CCDC144AA2RUR9 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC144AA2RUR9 RPP21-221ENST00000428040 594 ntTSL 2 BASIC25.63■■□□□ 1.69
CCDC144AA2RUR9 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC25.63■■□□□ 1.69
CCDC144AA2RUR9 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC144AA2RUR9 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC25.63■■□□□ 1.69
CCDC144AA2RUR9 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC25.63■■□□□ 1.69
CCDC144AA2RUR9 AC105339.3-201ENST00000560043 636 ntBASIC25.63■■□□□ 1.69
CCDC144AA2RUR9 TMED1-207ENST00000591695 809 ntTSL 5 BASIC25.63■■□□□ 1.69
CCDC144AA2RUR9 Z83851.2-201ENST00000609564 659 ntBASIC25.63■■□□□ 1.69
CCDC144AA2RUR9 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
CCDC144AA2RUR9 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC25.62■■□□□ 1.69
CCDC144AA2RUR9 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CCDC144AA2RUR9 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
CCDC144AA2RUR9 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC25.62■■□□□ 1.69
CCDC144AA2RUR9 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CCDC144AA2RUR9 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
CCDC144AA2RUR9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms