Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF103-CHMP3A0A140T963 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
RNF103-CHMP3A0A140T963 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF103-CHMP3A0A140T963 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF103-CHMP3A0A140T963 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF103-CHMP3A0A140T963 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF103-CHMP3A0A140T963 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF103-CHMP3A0A140T963 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.33■□□□□ 0.36
RNF103-CHMP3A0A140T963 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 FLJ13224-201ENST00000313737 1514 ntBASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF103-CHMP3A0A140T963 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF103-CHMP3A0A140T963 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF103-CHMP3A0A140T963 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RNF103-CHMP3A0A140T963 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF103-CHMP3A0A140T963 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF103-CHMP3A0A140T963 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF103-CHMP3A0A140T963 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
RNF103-CHMP3A0A140T963 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF103-CHMP3A0A140T963 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF103-CHMP3A0A140T963 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF103-CHMP3A0A140T963 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF103-CHMP3A0A140T963 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF103-CHMP3A0A140T963 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF103-CHMP3A0A140T963 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF103-CHMP3A0A140T963 SLC25A1P2-201ENST00000430693 912 ntBASIC17.31■□□□□ 0.36
RNF103-CHMP3A0A140T963 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF103-CHMP3A0A140T963 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.31■□□□□ 0.36
RNF103-CHMP3A0A140T963 AP000525.1-201ENST00000608286 694 ntBASIC17.31■□□□□ 0.36
RNF103-CHMP3A0A140T963 AC099343.3-201ENST00000605834 2503 ntBASIC17.31■□□□□ 0.36
RNF103-CHMP3A0A140T963 AC141586.5-201ENST00000624546 2050 ntBASIC17.31■□□□□ 0.36
RNF103-CHMP3A0A140T963 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RNF103-CHMP3A0A140T963 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RNF103-CHMP3A0A140T963 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF103-CHMP3A0A140T963 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF103-CHMP3A0A140T963 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF103-CHMP3A0A140T963 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF103-CHMP3A0A140T963 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF103-CHMP3A0A140T963 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF103-CHMP3A0A140T963 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF103-CHMP3A0A140T963 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF103-CHMP3A0A140T963 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 AP003041.3-201ENST00000527151 707 ntBASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms