Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCDC163A0A0D9SF12 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CCDC163A0A0D9SF12 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC163A0A0D9SF12 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC163A0A0D9SF12 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC163A0A0D9SF12 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CCDC163A0A0D9SF12 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC163A0A0D9SF12 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCDC163A0A0D9SF12 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC163A0A0D9SF12 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCDC163A0A0D9SF12 AL499627.1-201ENST00000569373 2188 ntBASIC17.67■□□□□ 0.42
CCDC163A0A0D9SF12 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC163A0A0D9SF12 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC163A0A0D9SF12 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC163A0A0D9SF12 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC163A0A0D9SF12 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC163A0A0D9SF12 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC163A0A0D9SF12 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC163A0A0D9SF12 CEND1P1-201ENST00000451006 455 ntBASIC17.67■□□□□ 0.42
CCDC163A0A0D9SF12 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.67■□□□□ 0.42
CCDC163A0A0D9SF12 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.67■□□□□ 0.42
CCDC163A0A0D9SF12 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC163A0A0D9SF12 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC163A0A0D9SF12 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC163A0A0D9SF12 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC163A0A0D9SF12 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC163A0A0D9SF12 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CCDC163A0A0D9SF12 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC163A0A0D9SF12 AIRN-201ENST00000601203 4374 ntBASIC17.67■□□□□ 0.42
CCDC163A0A0D9SF12 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC163A0A0D9SF12 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC163A0A0D9SF12 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CCDC163A0A0D9SF12 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC163A0A0D9SF12 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC163A0A0D9SF12 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC163A0A0D9SF12 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC163A0A0D9SF12 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC163A0A0D9SF12 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC163A0A0D9SF12 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC163A0A0D9SF12 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC163A0A0D9SF12 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC163A0A0D9SF12 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC163A0A0D9SF12 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC163A0A0D9SF12 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC163A0A0D9SF12 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC163A0A0D9SF12 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC163A0A0D9SF12 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CCDC163A0A0D9SF12 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC163A0A0D9SF12 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC163A0A0D9SF12 AC011467.4-201ENST00000594891 528 ntBASIC17.66■□□□□ 0.42
CCDC163A0A0D9SF12 AC010654.1-201ENST00000615722 808 ntBASIC17.66■□□□□ 0.42
CCDC163A0A0D9SF12 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC163A0A0D9SF12 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC163A0A0D9SF12 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC163A0A0D9SF12 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC163A0A0D9SF12 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC163A0A0D9SF12 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC163A0A0D9SF12 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CCDC163A0A0D9SF12 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC163A0A0D9SF12 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC163A0A0D9SF12 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC163A0A0D9SF12 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC163A0A0D9SF12 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC163A0A0D9SF12 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC163A0A0D9SF12 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC163A0A0D9SF12 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC163A0A0D9SF12 GPR89P-201ENST00000407924 1495 ntBASIC17.65■□□□□ 0.42
CCDC163A0A0D9SF12 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC163A0A0D9SF12 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC163A0A0D9SF12 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC163A0A0D9SF12 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC163A0A0D9SF12 MIR770-201ENST00000390219 98 ntBASIC17.65■□□□□ 0.42
CCDC163A0A0D9SF12 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC163A0A0D9SF12 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC163A0A0D9SF12 SIGLEC30P-201ENST00000455569 941 ntBASIC17.65■□□□□ 0.42
CCDC163A0A0D9SF12 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC163A0A0D9SF12 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC163A0A0D9SF12 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC163A0A0D9SF12 PDPK2P-202ENST00000562415 1191 ntBASIC17.65■□□□□ 0.42
CCDC163A0A0D9SF12 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC163A0A0D9SF12 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC163A0A0D9SF12 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.65■□□□□ 0.42
CCDC163A0A0D9SF12 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC163A0A0D9SF12 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC163A0A0D9SF12 AL049812.1-201ENST00000432563 2267 ntBASIC17.65■□□□□ 0.42
CCDC163A0A0D9SF12 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CCDC163A0A0D9SF12 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC163A0A0D9SF12 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CCDC163A0A0D9SF12 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CCDC163A0A0D9SF12 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC163A0A0D9SF12 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC163A0A0D9SF12 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC163A0A0D9SF12 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CCDC163A0A0D9SF12 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC163A0A0D9SF12 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC163A0A0D9SF12 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CCDC163A0A0D9SF12 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC163A0A0D9SF12 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC163A0A0D9SF12 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC163A0A0D9SF12 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms