Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
TRBV6-7A0A0A0MS04 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-7A0A0A0MS04 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-7A0A0A0MS04 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-7A0A0A0MS04 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-7A0A0A0MS04 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-7A0A0A0MS04 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRBV6-7A0A0A0MS04 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 RBM17P1-201ENST00000453646 1190 ntBASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 DUTP2-201ENST00000519164 463 ntBASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TRBV6-7A0A0A0MS04 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.02■□□□□ -0
TRBV6-7A0A0A0MS04 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRBV6-7A0A0A0MS04 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
TRBV6-7A0A0A0MS04 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRBV6-7A0A0A0MS04 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
TRBV6-7A0A0A0MS04 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TRBV6-7A0A0A0MS04 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.02■□□□□ -0
TRBV6-7A0A0A0MS04 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV6-7A0A0A0MS04 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.02■□□□□ -0
TRBV6-7A0A0A0MS04 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.02■□□□□ -0
TRBV6-7A0A0A0MS04 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.02■□□□□ -0
TRBV6-7A0A0A0MS04 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRBV6-7A0A0A0MS04 PCDHB19P-201ENST00000570871 2371 ntBASIC15.02■□□□□ -0
TRBV6-7A0A0A0MS04 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV6-7A0A0A0MS04 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRBV6-7A0A0A0MS04 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV6-7A0A0A0MS04 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.02■□□□□ -0
TRBV6-7A0A0A0MS04 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV6-7A0A0A0MS04 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRBV6-7A0A0A0MS04 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV6-7A0A0A0MS04 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
TRBV6-7A0A0A0MS04 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV6-7A0A0A0MS04 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TRBV6-7A0A0A0MS04 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV6-7A0A0A0MS04 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV6-7A0A0A0MS04 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV6-7A0A0A0MS04 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV6-7A0A0A0MS04 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRBV6-7A0A0A0MS04 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.02■□□□□ -0
TRBV6-7A0A0A0MS04 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.02■□□□□ -0
TRBV6-7A0A0A0MS04 Z99916.2-201ENST00000604037 246 ntBASIC15.02■□□□□ -0
TRBV6-7A0A0A0MS04 AC116562.4-202ENST00000641738 218 ntBASIC15.02■□□□□ -0
TRBV6-7A0A0A0MS04 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.02□□□□□ -0.01
TRBV6-7A0A0A0MS04 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV6-7A0A0A0MS04 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
TRBV6-7A0A0A0MS04 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV6-7A0A0A0MS04 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV6-7A0A0A0MS04 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV6-7A0A0A0MS04 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV6-7A0A0A0MS04 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
TRBV6-7A0A0A0MS04 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.02□□□□□ -0.01
TRBV6-7A0A0A0MS04 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV6-7A0A0A0MS04 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
TRBV6-7A0A0A0MS04 AL138688.1-201ENST00000624851 1594 ntBASIC15.02□□□□□ -0.01
TRBV6-7A0A0A0MS04 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV6-7A0A0A0MS04 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRBV6-7A0A0A0MS04 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms