Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CLCA3PQ9Y6N3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CLCA3PQ9Y6N3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CLCA3PQ9Y6N3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17■□□□□ 0.31
CLCA3PQ9Y6N3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17■□□□□ 0.31
CLCA3PQ9Y6N3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLCA3PQ9Y6N3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17■□□□□ 0.31
CLCA3PQ9Y6N3 LINC01126-201ENST00000623515 1646 ntBASIC17■□□□□ 0.31
CLCA3PQ9Y6N3 Z83836.1-201ENST00000624605 1642 ntBASIC17■□□□□ 0.31
CLCA3PQ9Y6N3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLCA3PQ9Y6N3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLCA3PQ9Y6N3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLCA3PQ9Y6N3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CLCA3PQ9Y6N3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CLCA3PQ9Y6N3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17■□□□□ 0.31
CLCA3PQ9Y6N3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17■□□□□ 0.31
CLCA3PQ9Y6N3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17■□□□□ 0.31
CLCA3PQ9Y6N3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CLCA3PQ9Y6N3 AC005332.3-201ENST00000589904 676 ntBASIC17■□□□□ 0.31
CLCA3PQ9Y6N3 GPR32P1-201ENST00000601788 811 ntBASIC17■□□□□ 0.31
CLCA3PQ9Y6N3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CLCA3PQ9Y6N3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17■□□□□ 0.31
CLCA3PQ9Y6N3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17■□□□□ 0.31
CLCA3PQ9Y6N3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17■□□□□ 0.31
CLCA3PQ9Y6N3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLCA3PQ9Y6N3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17■□□□□ 0.31
CLCA3PQ9Y6N3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17■□□□□ 0.31
CLCA3PQ9Y6N3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLCA3PQ9Y6N3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CLCA3PQ9Y6N3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17■□□□□ 0.31
CLCA3PQ9Y6N3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLCA3PQ9Y6N3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17■□□□□ 0.31
CLCA3PQ9Y6N3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17■□□□□ 0.31
CLCA3PQ9Y6N3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 IGHGP-201ENST00000390555 1178 ntBASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 TSPY22P-201ENST00000427496 604 ntBASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 BX276092.5-203ENST00000456199 560 ntBASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.99■□□□□ 0.31
CLCA3PQ9Y6N3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCA3PQ9Y6N3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCA3PQ9Y6N3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCA3PQ9Y6N3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCA3PQ9Y6N3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCA3PQ9Y6N3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.98■□□□□ 0.31
CLCA3PQ9Y6N3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CLCA3PQ9Y6N3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CLCA3PQ9Y6N3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLCA3PQ9Y6N3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCA3PQ9Y6N3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CLCA3PQ9Y6N3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCA3PQ9Y6N3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CLCA3PQ9Y6N3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLCA3PQ9Y6N3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.98■□□□□ 0.31
CLCA3PQ9Y6N3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.98■□□□□ 0.31
CLCA3PQ9Y6N3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLCA3PQ9Y6N3 UPK3BP1-201ENST00000428678 509 ntBASIC16.98■□□□□ 0.31
CLCA3PQ9Y6N3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLCA3PQ9Y6N3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.98■□□□□ 0.31
CLCA3PQ9Y6N3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLCA3PQ9Y6N3 AC113404.2-201ENST00000507884 177 ntBASIC16.98■□□□□ 0.31
CLCA3PQ9Y6N3 RNF126P1-202ENST00000569893 925 ntBASIC16.98■□□□□ 0.31
CLCA3PQ9Y6N3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.98■□□□□ 0.31
CLCA3PQ9Y6N3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CLCA3PQ9Y6N3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLCA3PQ9Y6N3 AL121672.3-201ENST00000608644 468 ntBASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms