Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC6Q9Y625 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC6Q9Y625 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
GPC6Q9Y625 KRT18P22-201ENST00000402024 1347 ntBASIC17.03■□□□□ 0.32
GPC6Q9Y625 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
GPC6Q9Y625 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GPC6Q9Y625 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
GPC6Q9Y625 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
GPC6Q9Y625 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GPC6Q9Y625 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC6Q9Y625 MIR149-201ENST00000384879 89 ntBASIC17.03■□□□□ 0.32
GPC6Q9Y625 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC6Q9Y625 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.03■□□□□ 0.32
GPC6Q9Y625 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC6Q9Y625 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
GPC6Q9Y625 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.03■□□□□ 0.32
GPC6Q9Y625 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC6Q9Y625 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.03■□□□□ 0.32
GPC6Q9Y625 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC6Q9Y625 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC6Q9Y625 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
GPC6Q9Y625 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GPC6Q9Y625 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
GPC6Q9Y625 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.03■□□□□ 0.32
GPC6Q9Y625 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GPC6Q9Y625 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
GPC6Q9Y625 KRT8P7-201ENST00000533003 1432 ntBASIC17.03■□□□□ 0.32
GPC6Q9Y625 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
GPC6Q9Y625 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GPC6Q9Y625 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GPC6Q9Y625 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.02■□□□□ 0.32
GPC6Q9Y625 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
GPC6Q9Y625 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
GPC6Q9Y625 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
GPC6Q9Y625 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GPC6Q9Y625 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GPC6Q9Y625 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GPC6Q9Y625 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GPC6Q9Y625 GNAS-203ENST00000306120 1878 ntBASIC17.02■□□□□ 0.32
GPC6Q9Y625 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GPC6Q9Y625 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GPC6Q9Y625 AC009102.3-201ENST00000623118 1491 ntBASIC17.02■□□□□ 0.32
GPC6Q9Y625 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GPC6Q9Y625 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
GPC6Q9Y625 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.02■□□□□ 0.32
GPC6Q9Y625 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.02■□□□□ 0.32
GPC6Q9Y625 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
GPC6Q9Y625 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
GPC6Q9Y625 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.02■□□□□ 0.32
GPC6Q9Y625 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GPC6Q9Y625 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.02■□□□□ 0.32
GPC6Q9Y625 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GPC6Q9Y625 AC145285.6-201ENST00000604632 637 ntBASIC17.02■□□□□ 0.32
GPC6Q9Y625 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.02■□□□□ 0.32
GPC6Q9Y625 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
GPC6Q9Y625 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
GPC6Q9Y625 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.02■□□□□ 0.31
GPC6Q9Y625 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GPC6Q9Y625 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GPC6Q9Y625 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
GPC6Q9Y625 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GPC6Q9Y625 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
GPC6Q9Y625 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
GPC6Q9Y625 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.02■□□□□ 0.31
GPC6Q9Y625 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
GPC6Q9Y625 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
GPC6Q9Y625 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GPC6Q9Y625 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
GPC6Q9Y625 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GPC6Q9Y625 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
GPC6Q9Y625 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
GPC6Q9Y625 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
GPC6Q9Y625 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
GPC6Q9Y625 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC6Q9Y625 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC6Q9Y625 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC6Q9Y625 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC6Q9Y625 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC6Q9Y625 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GPC6Q9Y625 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC6Q9Y625 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC6Q9Y625 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.01■□□□□ 0.31
GPC6Q9Y625 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC6Q9Y625 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC6Q9Y625 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC6Q9Y625 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GPC6Q9Y625 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GPC6Q9Y625 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.01■□□□□ 0.31
GPC6Q9Y625 AL512604.3-201ENST00000569583 964 ntBASIC17.01■□□□□ 0.31
GPC6Q9Y625 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.01■□□□□ 0.31
GPC6Q9Y625 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
GPC6Q9Y625 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC6Q9Y625 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC6Q9Y625 AC134043.2-201ENST00000624206 2238 ntBASIC17.01■□□□□ 0.31
GPC6Q9Y625 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC6Q9Y625 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.01■□□□□ 0.31
GPC6Q9Y625 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC6Q9Y625 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.01■□□□□ 0.31
GPC6Q9Y625 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC6Q9Y625 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms