Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 IGHGP-201ENST00000390555 1178 ntBASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 AP003733.1-201ENST00000491725 852 ntBASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 AL691432.3-201ENST00000621860 400 ntBASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 KRT18P1-202ENST00000452408 1331 ntBASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HRH3Q9Y5N1 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 BCL2-203ENST00000589955 5011 ntBASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 PHGDH-209ENST00000641074 1780 ntBASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 TPSP2-201ENST00000561760 610 ntBASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 LINC00167-201ENST00000530583 1419 ntBASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HRH3Q9Y5N1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HRH3Q9Y5N1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
HRH3Q9Y5N1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HRH3Q9Y5N1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HRH3Q9Y5N1 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
HRH3Q9Y5N1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HRH3Q9Y5N1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HRH3Q9Y5N1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HRH3Q9Y5N1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HRH3Q9Y5N1 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HRH3Q9Y5N1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.58■□□□□ 0.24
HRH3Q9Y5N1 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.58■□□□□ 0.24
HRH3Q9Y5N1 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.58■□□□□ 0.24
HRH3Q9Y5N1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.58■□□□□ 0.24
HRH3Q9Y5N1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.58■□□□□ 0.24
HRH3Q9Y5N1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HRH3Q9Y5N1 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
HRH3Q9Y5N1 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HRH3Q9Y5N1 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.58■□□□□ 0.24
HRH3Q9Y5N1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.58■□□□□ 0.24
HRH3Q9Y5N1 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
HRH3Q9Y5N1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.58■□□□□ 0.24
HRH3Q9Y5N1 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HRH3Q9Y5N1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
HRH3Q9Y5N1 AC132938.6-201ENST00000623828 1655 ntBASIC16.58■□□□□ 0.24
HRH3Q9Y5N1 AC093677.2-201ENST00000600169 1863 ntBASIC16.58■□□□□ 0.24
HRH3Q9Y5N1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HRH3Q9Y5N1 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HRH3Q9Y5N1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
HRH3Q9Y5N1 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HRH3Q9Y5N1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
HRH3Q9Y5N1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
HRH3Q9Y5N1 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
HRH3Q9Y5N1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms