Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA11Q9Y5H2 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA11Q9Y5H2 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA11Q9Y5H2 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA11Q9Y5H2 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA11Q9Y5H2 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA11Q9Y5H2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.44■□□□□ 0.38
PCDHGA11Q9Y5H2 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHGA11Q9Y5H2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA11Q9Y5H2 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA11Q9Y5H2 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA11Q9Y5H2 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA11Q9Y5H2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA11Q9Y5H2 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA11Q9Y5H2 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA11Q9Y5H2 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA11Q9Y5H2 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA11Q9Y5H2 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA11Q9Y5H2 DUTP2-201ENST00000519164 463 ntBASIC17.44■□□□□ 0.38
PCDHGA11Q9Y5H2 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA11Q9Y5H2 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA11Q9Y5H2 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PCDHGA11Q9Y5H2 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.44■□□□□ 0.38
PCDHGA11Q9Y5H2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA11Q9Y5H2 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.44■□□□□ 0.38
PCDHGA11Q9Y5H2 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
PCDHGA11Q9Y5H2 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PCDHGA11Q9Y5H2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA11Q9Y5H2 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHGA11Q9Y5H2 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA11Q9Y5H2 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA11Q9Y5H2 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA11Q9Y5H2 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA11Q9Y5H2 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHGA11Q9Y5H2 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA11Q9Y5H2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PCDHGA11Q9Y5H2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHGA11Q9Y5H2 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA11Q9Y5H2 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PCDHGA11Q9Y5H2 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA11Q9Y5H2 KRT18P55-202ENST00000578578 1546 ntBASIC17.43■□□□□ 0.38
PCDHGA11Q9Y5H2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA11Q9Y5H2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA11Q9Y5H2 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA11Q9Y5H2 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA11Q9Y5H2 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA11Q9Y5H2 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.43■□□□□ 0.38
PCDHGA11Q9Y5H2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA11Q9Y5H2 AL441883.1-201ENST00000566170 1045 ntBASIC17.43■□□□□ 0.38
PCDHGA11Q9Y5H2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.43■□□□□ 0.38
PCDHGA11Q9Y5H2 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA11Q9Y5H2 LINC01023-201ENST00000606054 436 ntBASIC17.43■□□□□ 0.38
PCDHGA11Q9Y5H2 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHGA11Q9Y5H2 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA11Q9Y5H2 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA11Q9Y5H2 AC073508.3-201ENST00000619697 1419 ntBASIC17.43■□□□□ 0.38
PCDHGA11Q9Y5H2 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PCDHGA11Q9Y5H2 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHGA11Q9Y5H2 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PCDHGA11Q9Y5H2 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA11Q9Y5H2 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA11Q9Y5H2 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHGA11Q9Y5H2 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA11Q9Y5H2 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 STARP1-201ENST00000397973 869 ntBASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 AC211429.1-201ENST00000415277 523 ntBASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 YBX1P2-201ENST00000489612 999 ntBASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 AC113404.2-201ENST00000507884 177 ntBASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 AC011558.1-201ENST00000623459 338 ntBASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 KRT89P-201ENST00000620027 1478 ntBASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
PCDHGA11Q9Y5H2 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms