Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM17Q9Y577 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIM17Q9Y577 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM17Q9Y577 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM17Q9Y577 HNRNPFP1-201ENST00000391730 1133 ntBASIC20.19■□□□□ 0.82
TRIM17Q9Y577 AC236430.1-201ENST00000402231 743 ntBASIC20.19■□□□□ 0.82
TRIM17Q9Y577 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.19■□□□□ 0.82
TRIM17Q9Y577 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIM17Q9Y577 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TRIM17Q9Y577 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.19■□□□□ 0.82
TRIM17Q9Y577 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM17Q9Y577 AC022145.2-201ENST00000598203 171 ntBASIC20.19■□□□□ 0.82
TRIM17Q9Y577 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
TRIM17Q9Y577 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC20.19■□□□□ 0.82
TRIM17Q9Y577 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC20.19■□□□□ 0.82
TRIM17Q9Y577 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM17Q9Y577 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIM17Q9Y577 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM17Q9Y577 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM17Q9Y577 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM17Q9Y577 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
TRIM17Q9Y577 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM17Q9Y577 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC20.18■□□□□ 0.82
TRIM17Q9Y577 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM17Q9Y577 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.18■□□□□ 0.82
TRIM17Q9Y577 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM17Q9Y577 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM17Q9Y577 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.18■□□□□ 0.82
TRIM17Q9Y577 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TRIM17Q9Y577 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM17Q9Y577 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM17Q9Y577 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.18■□□□□ 0.82
TRIM17Q9Y577 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.18■□□□□ 0.82
TRIM17Q9Y577 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC20.18■□□□□ 0.82
TRIM17Q9Y577 RHOQP3-201ENST00000437982 621 ntBASIC20.18■□□□□ 0.82
TRIM17Q9Y577 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM17Q9Y577 SLBP-205ENST00000488267 987 ntTSL 2 BASIC20.18■□□□□ 0.82
TRIM17Q9Y577 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC20.18■□□□□ 0.82
TRIM17Q9Y577 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM17Q9Y577 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM17Q9Y577 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM17Q9Y577 AL008721.1-201ENST00000609964 604 ntBASIC20.18■□□□□ 0.82
TRIM17Q9Y577 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TRIM17Q9Y577 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM17Q9Y577 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TRIM17Q9Y577 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.18■□□□□ 0.82
TRIM17Q9Y577 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM17Q9Y577 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TRIM17Q9Y577 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM17Q9Y577 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM17Q9Y577 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TRIM17Q9Y577 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TRIM17Q9Y577 AC010460.3-201ENST00000511359 1579 ntBASIC20.17■□□□□ 0.82
TRIM17Q9Y577 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TRIM17Q9Y577 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM17Q9Y577 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM17Q9Y577 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM17Q9Y577 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM17Q9Y577 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM17Q9Y577 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
TRIM17Q9Y577 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM17Q9Y577 OARD1-208ENST00000469104 704 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM17Q9Y577 AC067863.1-201ENST00000494933 530 ntBASIC20.17■□□□□ 0.82
TRIM17Q9Y577 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20.17■□□□□ 0.82
TRIM17Q9Y577 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC20.17■□□□□ 0.82
TRIM17Q9Y577 AC007064.4-201ENST00000637740 555 ntBASIC20.17■□□□□ 0.82
TRIM17Q9Y577 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM17Q9Y577 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM17Q9Y577 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.17■□□□□ 0.82
TRIM17Q9Y577 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC20.17■□□□□ 0.82
TRIM17Q9Y577 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM17Q9Y577 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM17Q9Y577 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM17Q9Y577 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM17Q9Y577 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
TRIM17Q9Y577 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC20.17■□□□□ 0.82
TRIM17Q9Y577 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.16■□□□□ 0.82
TRIM17Q9Y577 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.16■□□□□ 0.82
TRIM17Q9Y577 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM17Q9Y577 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM17Q9Y577 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TRIM17Q9Y577 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.16■□□□□ 0.82
TRIM17Q9Y577 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM17Q9Y577 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TRIM17Q9Y577 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM17Q9Y577 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM17Q9Y577 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM17Q9Y577 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
TRIM17Q9Y577 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM17Q9Y577 AC002472.2-201ENST00000442739 958 ntBASIC20.16■□□□□ 0.82
TRIM17Q9Y577 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC20.16■□□□□ 0.82
TRIM17Q9Y577 GAPDHP21-201ENST00000450301 1010 ntBASIC20.16■□□□□ 0.82
TRIM17Q9Y577 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM17Q9Y577 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC20.16■□□□□ 0.82
TRIM17Q9Y577 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
TRIM17Q9Y577 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.16■□□□□ 0.82
TRIM17Q9Y577 AC023141.13-201ENST00000604991 943 ntBASIC20.16■□□□□ 0.82
TRIM17Q9Y577 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.16■□□□□ 0.82
TRIM17Q9Y577 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM17Q9Y577 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms