Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF6Q9Y4K3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF6Q9Y4K3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF6Q9Y4K3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF6Q9Y4K3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF6Q9Y4K3 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.51■□□□□ 0.39
TRAF6Q9Y4K3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF6Q9Y4K3 AC010653.2-201ENST00000623505 997 ntBASIC17.51■□□□□ 0.39
TRAF6Q9Y4K3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRAF6Q9Y4K3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF6Q9Y4K3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF6Q9Y4K3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF6Q9Y4K3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRAF6Q9Y4K3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF6Q9Y4K3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.51■□□□□ 0.39
TRAF6Q9Y4K3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.51■□□□□ 0.39
TRAF6Q9Y4K3 AC133963.1-201ENST00000504166 1679 ntBASIC17.51■□□□□ 0.39
TRAF6Q9Y4K3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAF6Q9Y4K3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF6Q9Y4K3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF6Q9Y4K3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF6Q9Y4K3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF6Q9Y4K3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAF6Q9Y4K3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 AC022898.2-201ENST00000616822 1312 ntBASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 SEC1P-202ENST00000473944 940 ntBASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 C2orf69P3-201ENST00000565542 1120 ntBASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 PKD1P1-201ENST00000458669 6805 ntBASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAF6Q9Y4K3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 AL138688.1-201ENST00000624851 1594 ntBASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 MIR1238-201ENST00000408483 83 ntBASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 TSPY7P-201ENST00000431358 1114 ntBASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 MIR4785-201ENST00000585005 73 ntBASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 TNRC18P3-201ENST00000441896 2691 ntBASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.49■□□□□ 0.39
TRAF6Q9Y4K3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms