Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.66■□□□□ 0.58
AP4E1Q9UPM8 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.66■□□□□ 0.58
AP4E1Q9UPM8 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.66■□□□□ 0.58
AP4E1Q9UPM8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
AP4E1Q9UPM8 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.66■□□□□ 0.58
AP4E1Q9UPM8 AC009154.2-201ENST00000621177 724 ntBASIC18.66■□□□□ 0.58
AP4E1Q9UPM8 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
AP4E1Q9UPM8 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP4E1Q9UPM8 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP4E1Q9UPM8 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
AP4E1Q9UPM8 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP4E1Q9UPM8 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
AP4E1Q9UPM8 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP4E1Q9UPM8 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP4E1Q9UPM8 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP4E1Q9UPM8 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP4E1Q9UPM8 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
AP4E1Q9UPM8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4E1Q9UPM8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4E1Q9UPM8 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4E1Q9UPM8 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
AP4E1Q9UPM8 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4E1Q9UPM8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
AP4E1Q9UPM8 AC012317.2-201ENST00000623305 2251 ntBASIC18.65■□□□□ 0.58
AP4E1Q9UPM8 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AP4E1Q9UPM8 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AP4E1Q9UPM8 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4E1Q9UPM8 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4E1Q9UPM8 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.65■□□□□ 0.58
AP4E1Q9UPM8 AL136038.3-201ENST00000561909 1096 ntBASIC18.65■□□□□ 0.58
AP4E1Q9UPM8 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.65■□□□□ 0.58
AP4E1Q9UPM8 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.65■□□□□ 0.58
AP4E1Q9UPM8 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.65■□□□□ 0.58
AP4E1Q9UPM8 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4E1Q9UPM8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4E1Q9UPM8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4E1Q9UPM8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.65■□□□□ 0.58
AP4E1Q9UPM8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.65■□□□□ 0.58
AP4E1Q9UPM8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4E1Q9UPM8 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
AP4E1Q9UPM8 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4E1Q9UPM8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.65■□□□□ 0.58
AP4E1Q9UPM8 AC005332.8-201ENST00000622750 2735 ntBASIC18.65■□□□□ 0.58
AP4E1Q9UPM8 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP4E1Q9UPM8 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
AP4E1Q9UPM8 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
AP4E1Q9UPM8 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
AP4E1Q9UPM8 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
AP4E1Q9UPM8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 AL590326.2-201ENST00000625139 305 ntBASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 AL121956.5-201ENST00000625261 221 ntBASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 GNAS-203ENST00000306120 1878 ntBASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.64■□□□□ 0.57
AP4E1Q9UPM8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP4E1Q9UPM8 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
AP4E1Q9UPM8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
AP4E1Q9UPM8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP4E1Q9UPM8 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP4E1Q9UPM8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.63■□□□□ 0.57
AP4E1Q9UPM8 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP4E1Q9UPM8 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.63■□□□□ 0.57
AP4E1Q9UPM8 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP4E1Q9UPM8 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP4E1Q9UPM8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
AP4E1Q9UPM8 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
AP4E1Q9UPM8 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP4E1Q9UPM8 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP4E1Q9UPM8 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms