Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPIPA1Q9UND3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPIPA1Q9UND3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPIPA1Q9UND3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPIPA1Q9UND3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
NPIPA1Q9UND3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPIPA1Q9UND3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
NPIPA1Q9UND3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPIPA1Q9UND3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPIPA1Q9UND3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPIPA1Q9UND3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
NPIPA1Q9UND3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPIPA1Q9UND3 KRT17P6-201ENST00000453795 1220 ntBASIC16.59■□□□□ 0.25
NPIPA1Q9UND3 VENTXP7-201ENST00000475503 772 ntBASIC16.59■□□□□ 0.25
NPIPA1Q9UND3 KRT18P41-201ENST00000518924 1277 ntBASIC16.59■□□□□ 0.25
NPIPA1Q9UND3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.59■□□□□ 0.25
NPIPA1Q9UND3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.59■□□□□ 0.25
NPIPA1Q9UND3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.59■□□□□ 0.25
NPIPA1Q9UND3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.59■□□□□ 0.25
NPIPA1Q9UND3 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
NPIPA1Q9UND3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.59■□□□□ 0.25
NPIPA1Q9UND3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPIPA1Q9UND3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.59■□□□□ 0.25
NPIPA1Q9UND3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPIPA1Q9UND3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPIPA1Q9UND3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPIPA1Q9UND3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.59■□□□□ 0.25
NPIPA1Q9UND3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.59■□□□□ 0.25
NPIPA1Q9UND3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
NPIPA1Q9UND3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NPIPA1Q9UND3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.58■□□□□ 0.25
NPIPA1Q9UND3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
NPIPA1Q9UND3 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
NPIPA1Q9UND3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 AL163051.1-201ENST00000569214 1512 ntBASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 AC135050.7-201ENST00000624508 2218 ntBASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPIPA1Q9UND3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPIPA1Q9UND3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPIPA1Q9UND3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPIPA1Q9UND3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPIPA1Q9UND3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPIPA1Q9UND3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NPIPA1Q9UND3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPIPA1Q9UND3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPIPA1Q9UND3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPIPA1Q9UND3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.57■□□□□ 0.24
NPIPA1Q9UND3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
NPIPA1Q9UND3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPIPA1Q9UND3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.57■□□□□ 0.24
NPIPA1Q9UND3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPIPA1Q9UND3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.57■□□□□ 0.24
NPIPA1Q9UND3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPIPA1Q9UND3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.57■□□□□ 0.24
NPIPA1Q9UND3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPIPA1Q9UND3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.57■□□□□ 0.24
NPIPA1Q9UND3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.57■□□□□ 0.24
NPIPA1Q9UND3 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.57■□□□□ 0.24
NPIPA1Q9UND3 AL031008.1-201ENST00000619963 541 ntBASIC16.57■□□□□ 0.24
NPIPA1Q9UND3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPIPA1Q9UND3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.57■□□□□ 0.24
NPIPA1Q9UND3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NPIPA1Q9UND3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPIPA1Q9UND3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPIPA1Q9UND3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPIPA1Q9UND3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NPIPA1Q9UND3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NPIPA1Q9UND3 AC099343.3-201ENST00000605834 2503 ntBASIC16.56■□□□□ 0.24
NPIPA1Q9UND3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms