Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 TPSP2-201ENST00000561760 610 ntBASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.34■□□□□ 0.69
GTF3C4Q9UKN8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GTF3C4Q9UKN8 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.33■□□□□ 0.69
GTF3C4Q9UKN8 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GTF3C4Q9UKN8 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
GTF3C4Q9UKN8 GNAS-203ENST00000306120 1878 ntBASIC19.33■□□□□ 0.69
GTF3C4Q9UKN8 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GTF3C4Q9UKN8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
GTF3C4Q9UKN8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.33■□□□□ 0.69
GTF3C4Q9UKN8 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
GTF3C4Q9UKN8 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
GTF3C4Q9UKN8 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
GTF3C4Q9UKN8 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.33■□□□□ 0.68
GTF3C4Q9UKN8 AC012313.10-201ENST00000623509 926 ntBASIC19.33■□□□□ 0.68
GTF3C4Q9UKN8 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.33■□□□□ 0.68
GTF3C4Q9UKN8 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
GTF3C4Q9UKN8 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GTF3C4Q9UKN8 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GTF3C4Q9UKN8 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GTF3C4Q9UKN8 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
GTF3C4Q9UKN8 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GTF3C4Q9UKN8 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.33■□□□□ 0.68
GTF3C4Q9UKN8 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.33■□□□□ 0.68
GTF3C4Q9UKN8 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GTF3C4Q9UKN8 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GTF3C4Q9UKN8 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GTF3C4Q9UKN8 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GTF3C4Q9UKN8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.32■□□□□ 0.68
GTF3C4Q9UKN8 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GTF3C4Q9UKN8 AC134043.2-201ENST00000624206 2238 ntBASIC19.32■□□□□ 0.68
GTF3C4Q9UKN8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GTF3C4Q9UKN8 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GTF3C4Q9UKN8 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
GTF3C4Q9UKN8 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GTF3C4Q9UKN8 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GTF3C4Q9UKN8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GTF3C4Q9UKN8 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GTF3C4Q9UKN8 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GTF3C4Q9UKN8 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
GTF3C4Q9UKN8 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.32■□□□□ 0.68
GTF3C4Q9UKN8 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GTF3C4Q9UKN8 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.32■□□□□ 0.68
GTF3C4Q9UKN8 DRAXINP1-201ENST00000437611 948 ntBASIC19.32■□□□□ 0.68
GTF3C4Q9UKN8 DUSP5P1-201ENST00000441325 1139 ntBASIC19.32■□□□□ 0.68
GTF3C4Q9UKN8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GTF3C4Q9UKN8 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
GTF3C4Q9UKN8 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GTF3C4Q9UKN8 AC124864.1-201ENST00000623408 392 ntBASIC19.32■□□□□ 0.68
GTF3C4Q9UKN8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GTF3C4Q9UKN8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GTF3C4Q9UKN8 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
GTF3C4Q9UKN8 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GTF3C4Q9UKN8 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GTF3C4Q9UKN8 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GTF3C4Q9UKN8 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
GTF3C4Q9UKN8 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GTF3C4Q9UKN8 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GTF3C4Q9UKN8 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.32■□□□□ 0.68
GTF3C4Q9UKN8 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 AP000997.3-201ENST00000623333 2250 ntBASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GTF3C4Q9UKN8 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms