Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
COL20A1Q9P218 IL9RP2-201ENST00000423948 1312 ntBASIC20.26■□□□□ 0.83
COL20A1Q9P218 AC022898.2-201ENST00000616822 1312 ntBASIC20.26■□□□□ 0.83
COL20A1Q9P218 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL20A1Q9P218 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.25■□□□□ 0.83
COL20A1Q9P218 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.25■□□□□ 0.83
COL20A1Q9P218 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL20A1Q9P218 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.25■□□□□ 0.83
COL20A1Q9P218 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL20A1Q9P218 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL20A1Q9P218 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
COL20A1Q9P218 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.25■□□□□ 0.83
COL20A1Q9P218 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.25■□□□□ 0.83
COL20A1Q9P218 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.25■□□□□ 0.83
COL20A1Q9P218 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.25■□□□□ 0.83
COL20A1Q9P218 AC073648.2-201ENST00000510116 352 ntBASIC20.25■□□□□ 0.83
COL20A1Q9P218 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL20A1Q9P218 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL20A1Q9P218 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.25■□□□□ 0.83
COL20A1Q9P218 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.25■□□□□ 0.83
COL20A1Q9P218 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL20A1Q9P218 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL20A1Q9P218 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL20A1Q9P218 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL20A1Q9P218 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.25■□□□□ 0.83
COL20A1Q9P218 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL20A1Q9P218 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
COL20A1Q9P218 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
COL20A1Q9P218 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.24■□□□□ 0.83
COL20A1Q9P218 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL20A1Q9P218 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.24■□□□□ 0.83
COL20A1Q9P218 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC20.24■□□□□ 0.83
COL20A1Q9P218 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL20A1Q9P218 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.24■□□□□ 0.83
COL20A1Q9P218 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL20A1Q9P218 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL20A1Q9P218 AL356309.3-201ENST00000624132 1934 ntBASIC20.24■□□□□ 0.83
COL20A1Q9P218 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL20A1Q9P218 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.24■□□□□ 0.83
COL20A1Q9P218 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
COL20A1Q9P218 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.24■□□□□ 0.83
COL20A1Q9P218 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
COL20A1Q9P218 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.24■□□□□ 0.83
COL20A1Q9P218 SCARNA2-201ENST00000458748 420 ntBASIC20.24■□□□□ 0.83
COL20A1Q9P218 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.24■□□□□ 0.83
COL20A1Q9P218 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.24■□□□□ 0.83
COL20A1Q9P218 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.24■□□□□ 0.83
COL20A1Q9P218 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.24■□□□□ 0.83
COL20A1Q9P218 NKAPP1-205ENST00000585790 367 ntBASIC20.24■□□□□ 0.83
COL20A1Q9P218 AC025062.2-201ENST00000605477 670 ntBASIC20.24■□□□□ 0.83
COL20A1Q9P218 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.24■□□□□ 0.83
COL20A1Q9P218 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.24■□□□□ 0.83
COL20A1Q9P218 AD001527.2-201ENST00000622994 785 ntBASIC20.24■□□□□ 0.83
COL20A1Q9P218 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL20A1Q9P218 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL20A1Q9P218 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
COL20A1Q9P218 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL20A1Q9P218 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.24■□□□□ 0.83
COL20A1Q9P218 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.24■□□□□ 0.83
COL20A1Q9P218 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL20A1Q9P218 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL20A1Q9P218 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL20A1Q9P218 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL20A1Q9P218 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
COL20A1Q9P218 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
COL20A1Q9P218 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.23■□□□□ 0.83
COL20A1Q9P218 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.23■□□□□ 0.83
COL20A1Q9P218 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
COL20A1Q9P218 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL20A1Q9P218 COX5BP2-201ENST00000392354 334 ntBASIC20.23■□□□□ 0.83
COL20A1Q9P218 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
COL20A1Q9P218 RPS2P1-201ENST00000434010 821 ntBASIC20.23■□□□□ 0.83
COL20A1Q9P218 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
COL20A1Q9P218 AC122714.2-201ENST00000502787 707 ntBASIC20.23■□□□□ 0.83
COL20A1Q9P218 PMPCAP1-201ENST00000508114 1576 ntBASIC20.23■□□□□ 0.83
COL20A1Q9P218 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.23■□□□□ 0.83
COL20A1Q9P218 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
COL20A1Q9P218 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL20A1Q9P218 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.23■□□□□ 0.83
COL20A1Q9P218 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
COL20A1Q9P218 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.23■□□□□ 0.83
COL20A1Q9P218 SIRPAP1-201ENST00000448467 1770 ntBASIC20.23■□□□□ 0.83
COL20A1Q9P218 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC20.23■□□□□ 0.83
COL20A1Q9P218 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.23■□□□□ 0.83
COL20A1Q9P218 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL20A1Q9P218 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL20A1Q9P218 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
COL20A1Q9P218 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL20A1Q9P218 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL20A1Q9P218 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL20A1Q9P218 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL20A1Q9P218 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.22■□□□□ 0.83
COL20A1Q9P218 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.22■□□□□ 0.83
COL20A1Q9P218 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL20A1Q9P218 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL20A1Q9P218 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.22■□□□□ 0.83
COL20A1Q9P218 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL20A1Q9P218 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.22■□□□□ 0.83
COL20A1Q9P218 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL20A1Q9P218 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms