Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PHRF1Q9P1Y6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC23.83■■□□□ 1.41
PHRF1Q9P1Y6 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PHRF1Q9P1Y6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PHRF1Q9P1Y6 FAM8A3P-201ENST00000427218 844 ntBASIC23.83■■□□□ 1.41
PHRF1Q9P1Y6 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC23.83■■□□□ 1.41
PHRF1Q9P1Y6 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC23.83■■□□□ 1.41
PHRF1Q9P1Y6 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
PHRF1Q9P1Y6 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC23.83■■□□□ 1.41
PHRF1Q9P1Y6 CROCCP3-202ENST00000420820 1947 ntBASIC23.83■■□□□ 1.4
PHRF1Q9P1Y6 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC23.83■■□□□ 1.4
PHRF1Q9P1Y6 PC-214ENST00000628663 1470 ntTSL 5 BASIC23.83■■□□□ 1.4
PHRF1Q9P1Y6 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.4
PHRF1Q9P1Y6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PHRF1Q9P1Y6 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC23.82■■□□□ 1.4
PHRF1Q9P1Y6 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC23.82■■□□□ 1.4
PHRF1Q9P1Y6 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PHRF1Q9P1Y6 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PHRF1Q9P1Y6 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PHRF1Q9P1Y6 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PHRF1Q9P1Y6 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC23.82■■□□□ 1.4
PHRF1Q9P1Y6 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC23.82■■□□□ 1.4
PHRF1Q9P1Y6 AC004790.2-201ENST00000623588 572 ntBASIC23.82■■□□□ 1.4
PHRF1Q9P1Y6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC23.82■■□□□ 1.4
PHRF1Q9P1Y6 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PHRF1Q9P1Y6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC23.82■■□□□ 1.4
PHRF1Q9P1Y6 PHGDH-209ENST00000641074 1780 ntBASIC23.82■■□□□ 1.4
PHRF1Q9P1Y6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
PHRF1Q9P1Y6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PHRF1Q9P1Y6 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PHRF1Q9P1Y6 AC126763.1-201ENST00000552015 2118 ntBASIC23.82■■□□□ 1.4
PHRF1Q9P1Y6 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PHRF1Q9P1Y6 AL139400.1-201ENST00000366220 510 ntBASIC23.81■■□□□ 1.4
PHRF1Q9P1Y6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC23.81■■□□□ 1.4
PHRF1Q9P1Y6 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC23.81■■□□□ 1.4
PHRF1Q9P1Y6 WDR53-203ENST00000429115 683 ntTSL 2 BASIC23.81■■□□□ 1.4
PHRF1Q9P1Y6 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PHRF1Q9P1Y6 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PHRF1Q9P1Y6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PHRF1Q9P1Y6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PHRF1Q9P1Y6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PHRF1Q9P1Y6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC23.81■■□□□ 1.4
PHRF1Q9P1Y6 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PHRF1Q9P1Y6 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
PHRF1Q9P1Y6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
PHRF1Q9P1Y6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC23.81■■□□□ 1.4
PHRF1Q9P1Y6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PHRF1Q9P1Y6 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PHRF1Q9P1Y6 AC003669.1-201ENST00000334569 611 ntBASIC23.81■■□□□ 1.4
PHRF1Q9P1Y6 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC23.81■■□□□ 1.4
PHRF1Q9P1Y6 CEND1P1-201ENST00000451006 455 ntBASIC23.81■■□□□ 1.4
PHRF1Q9P1Y6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC23.81■■□□□ 1.4
PHRF1Q9P1Y6 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC23.81■■□□□ 1.4
PHRF1Q9P1Y6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PHRF1Q9P1Y6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PHRF1Q9P1Y6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PHRF1Q9P1Y6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PHRF1Q9P1Y6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
PHRF1Q9P1Y6 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC23.8■■□□□ 1.4
PHRF1Q9P1Y6 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PHRF1Q9P1Y6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PHRF1Q9P1Y6 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PHRF1Q9P1Y6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PHRF1Q9P1Y6 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PHRF1Q9P1Y6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PHRF1Q9P1Y6 CBR1-202ENST00000399191 838 ntTSL 3 BASIC23.8■■□□□ 1.4
PHRF1Q9P1Y6 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PHRF1Q9P1Y6 VN2R19P-201ENST00000442399 1052 ntBASIC23.8■■□□□ 1.4
PHRF1Q9P1Y6 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
PHRF1Q9P1Y6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC23.8■■□□□ 1.4
PHRF1Q9P1Y6 AC091812.2-201ENST00000619081 385 ntBASIC23.8■■□□□ 1.4
PHRF1Q9P1Y6 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC23.79■■□□□ 1.4
PHRF1Q9P1Y6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
PHRF1Q9P1Y6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC23.79■■□□□ 1.4
PHRF1Q9P1Y6 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PHRF1Q9P1Y6 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PHRF1Q9P1Y6 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PHRF1Q9P1Y6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PHRF1Q9P1Y6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
PHRF1Q9P1Y6 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PHRF1Q9P1Y6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC23.79■■□□□ 1.4
PHRF1Q9P1Y6 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC23.79■■□□□ 1.4
PHRF1Q9P1Y6 PRSS29P-201ENST00000440800 595 ntBASIC23.79■■□□□ 1.4
PHRF1Q9P1Y6 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC23.79■■□□□ 1.4
PHRF1Q9P1Y6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC23.79■■□□□ 1.4
PHRF1Q9P1Y6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC23.79■■□□□ 1.4
PHRF1Q9P1Y6 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PHRF1Q9P1Y6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC23.79■■□□□ 1.4
PHRF1Q9P1Y6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC23.79■■□□□ 1.4
PHRF1Q9P1Y6 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PHRF1Q9P1Y6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PHRF1Q9P1Y6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PHRF1Q9P1Y6 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PHRF1Q9P1Y6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PHRF1Q9P1Y6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC23.79■■□□□ 1.4
PHRF1Q9P1Y6 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC23.79■■□□□ 1.4
PHRF1Q9P1Y6 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PHRF1Q9P1Y6 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC23.79■■□□□ 1.4
PHRF1Q9P1Y6 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PHRF1Q9P1Y6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms