Protein–RNA interactions for Protein: Q9NW08

POLR3B, DNA-directed RNA polymerase III subunit RPC2, humanhuman

Predicted RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3BQ9NW08 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3BQ9NW08 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.47■□□□□ 0.55
POLR3BQ9NW08 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3BQ9NW08 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3BQ9NW08 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.47■□□□□ 0.55
POLR3BQ9NW08 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.47■□□□□ 0.55
POLR3BQ9NW08 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.47■□□□□ 0.55
POLR3BQ9NW08 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.47■□□□□ 0.55
POLR3BQ9NW08 KRT18P67-201ENST00000432816 1264 ntBASIC18.47■□□□□ 0.55
POLR3BQ9NW08 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3BQ9NW08 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3BQ9NW08 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.47■□□□□ 0.55
POLR3BQ9NW08 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.47■□□□□ 0.55
POLR3BQ9NW08 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.47■□□□□ 0.55
POLR3BQ9NW08 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.47■□□□□ 0.55
POLR3BQ9NW08 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
POLR3BQ9NW08 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3BQ9NW08 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3BQ9NW08 AL354751.1-201ENST00000412768 1863 ntBASIC18.47■□□□□ 0.55
POLR3BQ9NW08 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3BQ9NW08 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3BQ9NW08 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
POLR3BQ9NW08 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
POLR3BQ9NW08 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3BQ9NW08 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.47■□□□□ 0.55
POLR3BQ9NW08 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.47■□□□□ 0.55
POLR3BQ9NW08 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3BQ9NW08 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3BQ9NW08 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3BQ9NW08 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3BQ9NW08 AL390961.4-201ENST00000623958 2535 ntBASIC18.47■□□□□ 0.55
POLR3BQ9NW08 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3BQ9NW08 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3BQ9NW08 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
POLR3BQ9NW08 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
POLR3BQ9NW08 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.47■□□□□ 0.55
POLR3BQ9NW08 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.47■□□□□ 0.55
POLR3BQ9NW08 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.46■□□□□ 0.55
POLR3BQ9NW08 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
POLR3BQ9NW08 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3BQ9NW08 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3BQ9NW08 KRT89P-201ENST00000620027 1478 ntBASIC18.46■□□□□ 0.55
POLR3BQ9NW08 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3BQ9NW08 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3BQ9NW08 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.46■□□□□ 0.55
POLR3BQ9NW08 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3BQ9NW08 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.46■□□□□ 0.55
POLR3BQ9NW08 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.46■□□□□ 0.55
POLR3BQ9NW08 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3BQ9NW08 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3BQ9NW08 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.46■□□□□ 0.55
POLR3BQ9NW08 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3BQ9NW08 POM121L3P-201ENST00000419331 1163 ntBASIC18.46■□□□□ 0.55
POLR3BQ9NW08 PMS2P1-201ENST00000431037 1228 ntBASIC18.46■□□□□ 0.55
POLR3BQ9NW08 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.46■□□□□ 0.55
POLR3BQ9NW08 HNRNPDP1-201ENST00000439535 754 ntBASIC18.46■□□□□ 0.55
POLR3BQ9NW08 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.46■□□□□ 0.55
POLR3BQ9NW08 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3BQ9NW08 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.46■□□□□ 0.55
POLR3BQ9NW08 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
POLR3BQ9NW08 AC005336.2-201ENST00000593183 939 ntBASIC18.46■□□□□ 0.55
POLR3BQ9NW08 AC008608.2-201ENST00000606089 416 ntBASIC18.46■□□□□ 0.55
POLR3BQ9NW08 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.46■□□□□ 0.55
POLR3BQ9NW08 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
POLR3BQ9NW08 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
POLR3BQ9NW08 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
POLR3BQ9NW08 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3BQ9NW08 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
POLR3BQ9NW08 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
POLR3BQ9NW08 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
POLR3BQ9NW08 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
POLR3BQ9NW08 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
POLR3BQ9NW08 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.46■□□□□ 0.54
POLR3BQ9NW08 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.45■□□□□ 0.54
POLR3BQ9NW08 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
POLR3BQ9NW08 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
POLR3BQ9NW08 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
POLR3BQ9NW08 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
POLR3BQ9NW08 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
POLR3BQ9NW08 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
POLR3BQ9NW08 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
POLR3BQ9NW08 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.45■□□□□ 0.54
POLR3BQ9NW08 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.45■□□□□ 0.54
POLR3BQ9NW08 MIR7706-201ENST00000613747 67 ntBASIC18.45■□□□□ 0.54
POLR3BQ9NW08 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.45■□□□□ 0.54
POLR3BQ9NW08 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
POLR3BQ9NW08 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
POLR3BQ9NW08 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
POLR3BQ9NW08 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
POLR3BQ9NW08 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
POLR3BQ9NW08 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
POLR3BQ9NW08 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
POLR3BQ9NW08 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.45■□□□□ 0.54
POLR3BQ9NW08 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
POLR3BQ9NW08 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
POLR3BQ9NW08 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
POLR3BQ9NW08 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
POLR3BQ9NW08 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.44■□□□□ 0.54
POLR3BQ9NW08 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
POLR3BQ9NW08 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms