Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
HPS4Q9NQG7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HPS4Q9NQG7 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HPS4Q9NQG7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.58■□□□□ 0.56
HPS4Q9NQG7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HPS4Q9NQG7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HPS4Q9NQG7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
HPS4Q9NQG7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HPS4Q9NQG7 AC125634.1-201ENST00000438758 1403 ntBASIC18.57■□□□□ 0.56
HPS4Q9NQG7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HPS4Q9NQG7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HPS4Q9NQG7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.57■□□□□ 0.56
HPS4Q9NQG7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HPS4Q9NQG7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HPS4Q9NQG7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
HPS4Q9NQG7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HPS4Q9NQG7 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HPS4Q9NQG7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
HPS4Q9NQG7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
HPS4Q9NQG7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HPS4Q9NQG7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HPS4Q9NQG7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.57■□□□□ 0.56
HPS4Q9NQG7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HPS4Q9NQG7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.57■□□□□ 0.56
HPS4Q9NQG7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HPS4Q9NQG7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.57■□□□□ 0.56
HPS4Q9NQG7 RBM17P3-201ENST00000417687 1192 ntBASIC18.57■□□□□ 0.56
HPS4Q9NQG7 RNPS1P1-201ENST00000507437 918 ntBASIC18.57■□□□□ 0.56
HPS4Q9NQG7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.57■□□□□ 0.56
HPS4Q9NQG7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.57■□□□□ 0.56
HPS4Q9NQG7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.57■□□□□ 0.56
HPS4Q9NQG7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.57■□□□□ 0.56
HPS4Q9NQG7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.57■□□□□ 0.56
HPS4Q9NQG7 MTDHP3-201ENST00000594186 672 ntBASIC18.57■□□□□ 0.56
HPS4Q9NQG7 AC011467.2-201ENST00000598425 242 ntBASIC18.57■□□□□ 0.56
HPS4Q9NQG7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.57■□□□□ 0.56
HPS4Q9NQG7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.57■□□□□ 0.56
HPS4Q9NQG7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HPS4Q9NQG7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HPS4Q9NQG7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.57■□□□□ 0.56
HPS4Q9NQG7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
HPS4Q9NQG7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HPS4Q9NQG7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.57■□□□□ 0.56
HPS4Q9NQG7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.57■□□□□ 0.56
HPS4Q9NQG7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HPS4Q9NQG7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HPS4Q9NQG7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.56■□□□□ 0.56
HPS4Q9NQG7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS4Q9NQG7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS4Q9NQG7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
HPS4Q9NQG7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
HPS4Q9NQG7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
HPS4Q9NQG7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS4Q9NQG7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.56■□□□□ 0.56
HPS4Q9NQG7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.56■□□□□ 0.56
HPS4Q9NQG7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS4Q9NQG7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS4Q9NQG7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HPS4Q9NQG7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
HPS4Q9NQG7 PMS2P1-201ENST00000431037 1228 ntBASIC18.56■□□□□ 0.56
HPS4Q9NQG7 HNRNPDP1-201ENST00000439535 754 ntBASIC18.56■□□□□ 0.56
HPS4Q9NQG7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.56■□□□□ 0.56
HPS4Q9NQG7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HPS4Q9NQG7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.56■□□□□ 0.56
HPS4Q9NQG7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.56■□□□□ 0.56
HPS4Q9NQG7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HPS4Q9NQG7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
HPS4Q9NQG7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
HPS4Q9NQG7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS4Q9NQG7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS4Q9NQG7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS4Q9NQG7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.56■□□□□ 0.56
HPS4Q9NQG7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS4Q9NQG7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
HPS4Q9NQG7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HPS4Q9NQG7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HPS4Q9NQG7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
HPS4Q9NQG7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HPS4Q9NQG7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.56■□□□□ 0.56
HPS4Q9NQG7 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.55■□□□□ 0.56
HPS4Q9NQG7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS4Q9NQG7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HPS4Q9NQG7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HPS4Q9NQG7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HPS4Q9NQG7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
HPS4Q9NQG7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HPS4Q9NQG7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS4Q9NQG7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS4Q9NQG7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HPS4Q9NQG7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.55■□□□□ 0.56
HPS4Q9NQG7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
HPS4Q9NQG7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
HPS4Q9NQG7 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.55■□□□□ 0.56
HPS4Q9NQG7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.55■□□□□ 0.56
HPS4Q9NQG7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.55■□□□□ 0.56
HPS4Q9NQG7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.55■□□□□ 0.56
HPS4Q9NQG7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.55■□□□□ 0.56
HPS4Q9NQG7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.55■□□□□ 0.56
HPS4Q9NQG7 FAM215A-202ENST00000632077 792 ntBASIC18.55■□□□□ 0.56
HPS4Q9NQG7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms