Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM9SF3Q9HD45 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 SDHAP2-201ENST00000455183 2001 ntBASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 MYLKP1-201ENST00000509077 1580 ntBASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 TP73-AS1-210ENST00000637775 1455 ntBASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 AL024508.2-201ENST00000607749 1894 ntBASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TM9SF3Q9HD45 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
TM9SF3Q9HD45 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM9SF3Q9HD45 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TM9SF3Q9HD45 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.95■□□□□ 0.46
TM9SF3Q9HD45 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM9SF3Q9HD45 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM9SF3Q9HD45 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM9SF3Q9HD45 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM9SF3Q9HD45 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM9SF3Q9HD45 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TM9SF3Q9HD45 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.95■□□□□ 0.46
TM9SF3Q9HD45 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM9SF3Q9HD45 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.95■□□□□ 0.46
TM9SF3Q9HD45 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM9SF3Q9HD45 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM9SF3Q9HD45 MIR574-201ENST00000385209 96 ntBASIC17.95■□□□□ 0.46
TM9SF3Q9HD45 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.95■□□□□ 0.46
TM9SF3Q9HD45 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM9SF3Q9HD45 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.95■□□□□ 0.46
TM9SF3Q9HD45 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.95■□□□□ 0.46
TM9SF3Q9HD45 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TM9SF3Q9HD45 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.95■□□□□ 0.46
TM9SF3Q9HD45 SLC25A1P1-201ENST00000528351 927 ntBASIC17.95■□□□□ 0.46
TM9SF3Q9HD45 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.95■□□□□ 0.46
TM9SF3Q9HD45 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.95■□□□□ 0.46
TM9SF3Q9HD45 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.95■□□□□ 0.46
TM9SF3Q9HD45 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM9SF3Q9HD45 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.95■□□□□ 0.46
TM9SF3Q9HD45 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TM9SF3Q9HD45 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TM9SF3Q9HD45 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM9SF3Q9HD45 AC112777.1-201ENST00000540175 1423 ntBASIC17.95■□□□□ 0.46
TM9SF3Q9HD45 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TM9SF3Q9HD45 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TM9SF3Q9HD45 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF3Q9HD45 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TM9SF3Q9HD45 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF3Q9HD45 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF3Q9HD45 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF3Q9HD45 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.94■□□□□ 0.46
TM9SF3Q9HD45 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF3Q9HD45 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF3Q9HD45 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF3Q9HD45 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
TM9SF3Q9HD45 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF3Q9HD45 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.94■□□□□ 0.46
TM9SF3Q9HD45 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF3Q9HD45 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.94■□□□□ 0.46
TM9SF3Q9HD45 AC093909.1-201ENST00000504731 1122 ntBASIC17.94■□□□□ 0.46
TM9SF3Q9HD45 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.94■□□□□ 0.46
TM9SF3Q9HD45 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF3Q9HD45 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.94■□□□□ 0.46
TM9SF3Q9HD45 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF3Q9HD45 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF3Q9HD45 AL355877.3-201ENST00000622820 899 ntBASIC17.94■□□□□ 0.46
TM9SF3Q9HD45 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF3Q9HD45 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF3Q9HD45 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF3Q9HD45 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TM9SF3Q9HD45 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.94■□□□□ 0.46
TM9SF3Q9HD45 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms