Protein–RNA interactions for Protein: Q9HB31

SEBOX, Homeobox protein SEBOX, humanhuman

Predicted RBP Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEBOXQ9HB31 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SEBOXQ9HB31 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SEBOXQ9HB31 AC113347.1-201ENST00000413321 391 ntBASIC15.28■□□□□ 0.04
SEBOXQ9HB31 LIN28AP1-201ENST00000429574 405 ntBASIC15.28■□□□□ 0.04
SEBOXQ9HB31 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
SEBOXQ9HB31 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.28■□□□□ 0.04
SEBOXQ9HB31 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
SEBOXQ9HB31 COX11P1-201ENST00000489116 835 ntBASIC15.28■□□□□ 0.04
SEBOXQ9HB31 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.28■□□□□ 0.04
SEBOXQ9HB31 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.28■□□□□ 0.04
SEBOXQ9HB31 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.28■□□□□ 0.04
SEBOXQ9HB31 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.28■□□□□ 0.04
SEBOXQ9HB31 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SEBOXQ9HB31 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.28■□□□□ 0.04
SEBOXQ9HB31 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.28■□□□□ 0.04
SEBOXQ9HB31 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SEBOXQ9HB31 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SEBOXQ9HB31 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SEBOXQ9HB31 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.28■□□□□ 0.04
SEBOXQ9HB31 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SEBOXQ9HB31 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
SEBOXQ9HB31 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
SEBOXQ9HB31 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SEBOXQ9HB31 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SEBOXQ9HB31 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SEBOXQ9HB31 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
SEBOXQ9HB31 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.27■□□□□ 0.04
SEBOXQ9HB31 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SEBOXQ9HB31 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SEBOXQ9HB31 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SEBOXQ9HB31 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SEBOXQ9HB31 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SEBOXQ9HB31 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.04
SEBOXQ9HB31 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.27■□□□□ 0.04
SEBOXQ9HB31 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SEBOXQ9HB31 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SEBOXQ9HB31 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.27■□□□□ 0.04
SEBOXQ9HB31 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SEBOXQ9HB31 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SEBOXQ9HB31 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.27■□□□□ 0.04
SEBOXQ9HB31 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SEBOXQ9HB31 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
SEBOXQ9HB31 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.27■□□□□ 0.04
SEBOXQ9HB31 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SEBOXQ9HB31 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.27■□□□□ 0.04
SEBOXQ9HB31 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.27■□□□□ 0.04
SEBOXQ9HB31 AC140113.3-201ENST00000605663 199 ntBASIC15.27■□□□□ 0.04
SEBOXQ9HB31 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SEBOXQ9HB31 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
SEBOXQ9HB31 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SEBOXQ9HB31 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SEBOXQ9HB31 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
SEBOXQ9HB31 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SEBOXQ9HB31 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SEBOXQ9HB31 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SEBOXQ9HB31 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SEBOXQ9HB31 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.27■□□□□ 0.03
SEBOXQ9HB31 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SEBOXQ9HB31 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SEBOXQ9HB31 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.27■□□□□ 0.03
SEBOXQ9HB31 AC138028.4-201ENST00000564984 1845 ntBASIC15.27■□□□□ 0.03
SEBOXQ9HB31 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEBOXQ9HB31 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SEBOXQ9HB31 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEBOXQ9HB31 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEBOXQ9HB31 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SEBOXQ9HB31 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.26■□□□□ 0.03
SEBOXQ9HB31 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SEBOXQ9HB31 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEBOXQ9HB31 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SEBOXQ9HB31 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEBOXQ9HB31 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEBOXQ9HB31 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEBOXQ9HB31 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEBOXQ9HB31 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEBOXQ9HB31 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEBOXQ9HB31 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEBOXQ9HB31 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEBOXQ9HB31 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.26■□□□□ 0.03
SEBOXQ9HB31 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.26■□□□□ 0.03
SEBOXQ9HB31 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.26■□□□□ 0.03
SEBOXQ9HB31 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SEBOXQ9HB31 AC133561.5-201ENST00000635547 218 ntBASIC15.26■□□□□ 0.03
SEBOXQ9HB31 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
SEBOXQ9HB31 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SEBOXQ9HB31 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.26■□□□□ 0.03
SEBOXQ9HB31 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.26■□□□□ 0.03
SEBOXQ9HB31 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SEBOXQ9HB31 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SEBOXQ9HB31 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SEBOXQ9HB31 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SEBOXQ9HB31 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.26■□□□□ 0.03
SEBOXQ9HB31 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
SEBOXQ9HB31 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SEBOXQ9HB31 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.25■□□□□ 0.03
SEBOXQ9HB31 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SEBOXQ9HB31 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.25■□□□□ 0.03
SEBOXQ9HB31 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SEBOXQ9HB31 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SEBOXQ9HB31 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms