Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PIF1Q9H611 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PIF1Q9H611 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.19■□□□□ 0.34
PIF1Q9H611 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PIF1Q9H611 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.19■□□□□ 0.34
PIF1Q9H611 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PIF1Q9H611 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PIF1Q9H611 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PIF1Q9H611 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PIF1Q9H611 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PIF1Q9H611 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.19■□□□□ 0.34
PIF1Q9H611 MFAP1P1-201ENST00000442257 1255 ntBASIC17.19■□□□□ 0.34
PIF1Q9H611 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.19■□□□□ 0.34
PIF1Q9H611 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.19■□□□□ 0.34
PIF1Q9H611 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.19■□□□□ 0.34
PIF1Q9H611 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
PIF1Q9H611 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.19■□□□□ 0.34
PIF1Q9H611 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PIF1Q9H611 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PIF1Q9H611 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.19■□□□□ 0.34
PIF1Q9H611 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PIF1Q9H611 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PIF1Q9H611 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PIF1Q9H611 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PIF1Q9H611 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PIF1Q9H611 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
PIF1Q9H611 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PIF1Q9H611 AC036111.1-201ENST00000533973 1582 ntBASIC17.19■□□□□ 0.34
PIF1Q9H611 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PIF1Q9H611 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.19■□□□□ 0.34
PIF1Q9H611 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PIF1Q9H611 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PIF1Q9H611 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PIF1Q9H611 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PIF1Q9H611 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PIF1Q9H611 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PIF1Q9H611 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PIF1Q9H611 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PIF1Q9H611 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PIF1Q9H611 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PIF1Q9H611 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.18■□□□□ 0.34
PIF1Q9H611 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.18■□□□□ 0.34
PIF1Q9H611 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
PIF1Q9H611 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PIF1Q9H611 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PIF1Q9H611 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
PIF1Q9H611 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.18■□□□□ 0.34
PIF1Q9H611 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.18■□□□□ 0.34
PIF1Q9H611 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.18■□□□□ 0.34
PIF1Q9H611 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.18■□□□□ 0.34
PIF1Q9H611 AC008550.1-201ENST00000511500 884 ntBASIC17.18■□□□□ 0.34
PIF1Q9H611 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.18■□□□□ 0.34
PIF1Q9H611 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.18■□□□□ 0.34
PIF1Q9H611 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.18■□□□□ 0.34
PIF1Q9H611 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PIF1Q9H611 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PIF1Q9H611 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PIF1Q9H611 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.18■□□□□ 0.34
PIF1Q9H611 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.18■□□□□ 0.34
PIF1Q9H611 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PIF1Q9H611 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PIF1Q9H611 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PIF1Q9H611 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PIF1Q9H611 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
PIF1Q9H611 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PIF1Q9H611 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PIF1Q9H611 AL355312.1-201ENST00000407115 2176 ntBASIC17.18■□□□□ 0.34
PIF1Q9H611 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.18■□□□□ 0.34
PIF1Q9H611 LINC01126-201ENST00000623515 1646 ntBASIC17.18■□□□□ 0.34
PIF1Q9H611 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.17■□□□□ 0.34
PIF1Q9H611 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PIF1Q9H611 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PIF1Q9H611 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PIF1Q9H611 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.17■□□□□ 0.34
PIF1Q9H611 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PIF1Q9H611 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.17■□□□□ 0.34
PIF1Q9H611 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.17■□□□□ 0.34
PIF1Q9H611 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
PIF1Q9H611 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PIF1Q9H611 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PIF1Q9H611 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PIF1Q9H611 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PIF1Q9H611 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PIF1Q9H611 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PIF1Q9H611 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PIF1Q9H611 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.17■□□□□ 0.34
PIF1Q9H611 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PIF1Q9H611 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.17■□□□□ 0.34
PIF1Q9H611 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PIF1Q9H611 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.17■□□□□ 0.34
PIF1Q9H611 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PIF1Q9H611 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PIF1Q9H611 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PIF1Q9H611 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PIF1Q9H611 AL049637.2-201ENST00000641778 930 ntBASIC17.17■□□□□ 0.34
PIF1Q9H611 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PIF1Q9H611 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PIF1Q9H611 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.17■□□□□ 0.34
PIF1Q9H611 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.17■□□□□ 0.34
PIF1Q9H611 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms