Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF41Q9H4P4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF41Q9H4P4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF41Q9H4P4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RNF41Q9H4P4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF41Q9H4P4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF41Q9H4P4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF41Q9H4P4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF41Q9H4P4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF41Q9H4P4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF41Q9H4P4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF41Q9H4P4 KRT18P56-201ENST00000507275 550 ntBASIC21.16■□□□□ 0.98
RNF41Q9H4P4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.16■□□□□ 0.98
RNF41Q9H4P4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF41Q9H4P4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.16■□□□□ 0.98
RNF41Q9H4P4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.16■□□□□ 0.98
RNF41Q9H4P4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.16■□□□□ 0.98
RNF41Q9H4P4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF41Q9H4P4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF41Q9H4P4 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF41Q9H4P4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
RNF41Q9H4P4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF41Q9H4P4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF41Q9H4P4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.16■□□□□ 0.98
RNF41Q9H4P4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF41Q9H4P4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF41Q9H4P4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF41Q9H4P4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 NSUN5P1-202ENST00000421140 1535 ntBASIC21.15■□□□□ 0.98
RNF41Q9H4P4 NSUN5P2-203ENST00000457352 1529 ntBASIC21.15■□□□□ 0.98
RNF41Q9H4P4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 AC125634.1-201ENST00000438758 1403 ntBASIC21.15■□□□□ 0.98
RNF41Q9H4P4 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 AC097374.2-201ENST00000618617 1306 ntBASIC21.15■□□□□ 0.98
RNF41Q9H4P4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 MINOS1P3-201ENST00000457048 203 ntBASIC21.15■□□□□ 0.98
RNF41Q9H4P4 AL138831.2-201ENST00000606564 490 ntBASIC21.15■□□□□ 0.98
RNF41Q9H4P4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF41Q9H4P4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
RNF41Q9H4P4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF41Q9H4P4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF41Q9H4P4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC21.14■□□□□ 0.98
RNF41Q9H4P4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.14■□□□□ 0.98
RNF41Q9H4P4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF41Q9H4P4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.14■□□□□ 0.98
RNF41Q9H4P4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF41Q9H4P4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF41Q9H4P4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RNF41Q9H4P4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF41Q9H4P4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF41Q9H4P4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF41Q9H4P4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF41Q9H4P4 SLC25A6P5-201ENST00000435663 894 ntBASIC21.14■□□□□ 0.97
RNF41Q9H4P4 NUS1P1-201ENST00000446295 882 ntBASIC21.14■□□□□ 0.97
RNF41Q9H4P4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RNF41Q9H4P4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF41Q9H4P4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RNF41Q9H4P4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF41Q9H4P4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF41Q9H4P4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF41Q9H4P4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.14■□□□□ 0.97
RNF41Q9H4P4 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.14■□□□□ 0.97
RNF41Q9H4P4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF41Q9H4P4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF41Q9H4P4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF41Q9H4P4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms