Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
FOXP3Q9BZS1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FOXP3Q9BZS1 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 UPK3BP1-201ENST00000428678 509 ntBASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 AC092647.4-201ENST00000457211 535 ntBASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 AL023803.3-201ENST00000615559 522 ntBASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 AC010653.2-201ENST00000623505 997 ntBASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 AL138688.1-201ENST00000624851 1594 ntBASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.55■□□□□ 0.56
FOXP3Q9BZS1 AC141586.5-201ENST00000624546 2050 ntBASIC18.54■□□□□ 0.56
FOXP3Q9BZS1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
FOXP3Q9BZS1 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXP3Q9BZS1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
FOXP3Q9BZS1 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXP3Q9BZS1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXP3Q9BZS1 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.54■□□□□ 0.56
FOXP3Q9BZS1 LINC01126-201ENST00000623515 1646 ntBASIC18.54■□□□□ 0.56
FOXP3Q9BZS1 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXP3Q9BZS1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
FOXP3Q9BZS1 TSPY5P-201ENST00000426936 936 ntBASIC18.54■□□□□ 0.56
FOXP3Q9BZS1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXP3Q9BZS1 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.54■□□□□ 0.56
FOXP3Q9BZS1 COX11P1-201ENST00000489116 835 ntBASIC18.54■□□□□ 0.56
FOXP3Q9BZS1 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FOXP3Q9BZS1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.54■□□□□ 0.56
FOXP3Q9BZS1 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.54■□□□□ 0.56
FOXP3Q9BZS1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.54■□□□□ 0.56
FOXP3Q9BZS1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
FOXP3Q9BZS1 AC141257.4-201ENST00000634557 245 ntBASIC18.54■□□□□ 0.56
FOXP3Q9BZS1 AC136944.6-201ENST00000634818 245 ntBASIC18.54■□□□□ 0.56
FOXP3Q9BZS1 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXP3Q9BZS1 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
FOXP3Q9BZS1 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXP3Q9BZS1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXP3Q9BZS1 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.54■□□□□ 0.56
FOXP3Q9BZS1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
FOXP3Q9BZS1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXP3Q9BZS1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
FOXP3Q9BZS1 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FOXP3Q9BZS1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
FOXP3Q9BZS1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.53■□□□□ 0.56
FOXP3Q9BZS1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXP3Q9BZS1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXP3Q9BZS1 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.53■□□□□ 0.56
FOXP3Q9BZS1 AC009053.2-201ENST00000563701 2365 ntBASIC18.53■□□□□ 0.56
FOXP3Q9BZS1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.53■□□□□ 0.56
FOXP3Q9BZS1 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
FOXP3Q9BZS1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXP3Q9BZS1 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXP3Q9BZS1 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXP3Q9BZS1 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXP3Q9BZS1 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXP3Q9BZS1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.53■□□□□ 0.56
FOXP3Q9BZS1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.53■□□□□ 0.56
FOXP3Q9BZS1 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.53■□□□□ 0.56
FOXP3Q9BZS1 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXP3Q9BZS1 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
FOXP3Q9BZS1 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.53■□□□□ 0.56
FOXP3Q9BZS1 KRT18P23-201ENST00000435622 1283 ntBASIC18.53■□□□□ 0.56
FOXP3Q9BZS1 TSPY17P-201ENST00000450329 467 ntBASIC18.53■□□□□ 0.56
FOXP3Q9BZS1 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.53■□□□□ 0.56
FOXP3Q9BZS1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
FOXP3Q9BZS1 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.53■□□□□ 0.56
FOXP3Q9BZS1 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.53■□□□□ 0.56
FOXP3Q9BZS1 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FOXP3Q9BZS1 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXP3Q9BZS1 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FOXP3Q9BZS1 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FOXP3Q9BZS1 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FOXP3Q9BZS1 PP12613-201ENST00000424958 2230 ntBASIC18.53■□□□□ 0.56
FOXP3Q9BZS1 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms