Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC21.45■■□□□ 1.02
UPF3BQ9BZI7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC21.45■■□□□ 1.02
UPF3BQ9BZI7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
UPF3BQ9BZI7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
UPF3BQ9BZI7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UPF3BQ9BZI7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
UPF3BQ9BZI7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UPF3BQ9BZI7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
UPF3BQ9BZI7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
UPF3BQ9BZI7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.45■■□□□ 1.02
UPF3BQ9BZI7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.45■■□□□ 1.02
UPF3BQ9BZI7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC21.45■■□□□ 1.02
UPF3BQ9BZI7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
UPF3BQ9BZI7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
UPF3BQ9BZI7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UPF3BQ9BZI7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
UPF3BQ9BZI7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
UPF3BQ9BZI7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UPF3BQ9BZI7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
UPF3BQ9BZI7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
UPF3BQ9BZI7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UPF3BQ9BZI7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC21.44■■□□□ 1.02
UPF3BQ9BZI7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
UPF3BQ9BZI7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
UPF3BQ9BZI7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UPF3BQ9BZI7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
UPF3BQ9BZI7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
UPF3BQ9BZI7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
UPF3BQ9BZI7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.44■■□□□ 1.02
UPF3BQ9BZI7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC21.44■■□□□ 1.02
UPF3BQ9BZI7 AP000523.1-201ENST00000398242 1049 ntBASIC21.44■■□□□ 1.02
UPF3BQ9BZI7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
UPF3BQ9BZI7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.44■■□□□ 1.02
UPF3BQ9BZI7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
UPF3BQ9BZI7 DUTP2-201ENST00000519164 463 ntBASIC21.44■■□□□ 1.02
UPF3BQ9BZI7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
UPF3BQ9BZI7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.44■■□□□ 1.02
UPF3BQ9BZI7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.44■■□□□ 1.02
UPF3BQ9BZI7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
UPF3BQ9BZI7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.44■■□□□ 1.02
UPF3BQ9BZI7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
UPF3BQ9BZI7 AL355312.1-201ENST00000407115 2176 ntBASIC21.44■■□□□ 1.02
UPF3BQ9BZI7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
UPF3BQ9BZI7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
UPF3BQ9BZI7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
UPF3BQ9BZI7 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC21.43■■□□□ 1.02
UPF3BQ9BZI7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.43■■□□□ 1.02
UPF3BQ9BZI7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
UPF3BQ9BZI7 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.43■■□□□ 1.02
UPF3BQ9BZI7 AL441883.1-201ENST00000566170 1045 ntBASIC21.43■■□□□ 1.02
UPF3BQ9BZI7 AC079602.3-201ENST00000623931 403 ntBASIC21.43■■□□□ 1.02
UPF3BQ9BZI7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
UPF3BQ9BZI7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.43■■□□□ 1.02
UPF3BQ9BZI7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
UPF3BQ9BZI7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
UPF3BQ9BZI7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UPF3BQ9BZI7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC21.43■■□□□ 1.02
UPF3BQ9BZI7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21.43■■□□□ 1.02
UPF3BQ9BZI7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.43■■□□□ 1.02
UPF3BQ9BZI7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
UPF3BQ9BZI7 AL645608.8-201ENST00000606034 2086 ntBASIC21.43■■□□□ 1.02
UPF3BQ9BZI7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UPF3BQ9BZI7 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC21.43■■□□□ 1.02
UPF3BQ9BZI7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
UPF3BQ9BZI7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
UPF3BQ9BZI7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
UPF3BQ9BZI7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
UPF3BQ9BZI7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UPF3BQ9BZI7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.42■■□□□ 1.02
UPF3BQ9BZI7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
UPF3BQ9BZI7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.42■■□□□ 1.02
UPF3BQ9BZI7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
UPF3BQ9BZI7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
UPF3BQ9BZI7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.42■■□□□ 1.02
UPF3BQ9BZI7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.42■■□□□ 1.02
UPF3BQ9BZI7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC21.42■■□□□ 1.02
UPF3BQ9BZI7 TK1-205ENST00000590862 642 ntTSL 3 BASIC21.42■■□□□ 1.02
UPF3BQ9BZI7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
UPF3BQ9BZI7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
UPF3BQ9BZI7 CEP83-AS1-201ENST00000623122 2482 ntBASIC21.42■■□□□ 1.02
UPF3BQ9BZI7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
UPF3BQ9BZI7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
UPF3BQ9BZI7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UPF3BQ9BZI7 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPF3BQ9BZI7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UPF3BQ9BZI7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UPF3BQ9BZI7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPF3BQ9BZI7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
UPF3BQ9BZI7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPF3BQ9BZI7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPF3BQ9BZI7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPF3BQ9BZI7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UPF3BQ9BZI7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC21.41■■□□□ 1.02
UPF3BQ9BZI7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UPF3BQ9BZI7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
UPF3BQ9BZI7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPF3BQ9BZI7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.41■■□□□ 1.02
UPF3BQ9BZI7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.41■■□□□ 1.02
UPF3BQ9BZI7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.41■■□□□ 1.02
UPF3BQ9BZI7 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms