Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRFN3Q9BTN0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRFN3Q9BTN0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.8■□□□□ 0.44
LRFN3Q9BTN0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LRFN3Q9BTN0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
LRFN3Q9BTN0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
LRFN3Q9BTN0 Z82202.1-201ENST00000623446 1880 ntBASIC17.8■□□□□ 0.44
LRFN3Q9BTN0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
LRFN3Q9BTN0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.8■□□□□ 0.44
LRFN3Q9BTN0 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRFN3Q9BTN0 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRFN3Q9BTN0 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRFN3Q9BTN0 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.8■□□□□ 0.44
LRFN3Q9BTN0 MRPS18AP1-201ENST00000414458 589 ntBASIC17.8■□□□□ 0.44
LRFN3Q9BTN0 AL355306.1-201ENST00000415580 579 ntBASIC17.8■□□□□ 0.44
LRFN3Q9BTN0 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.8■□□□□ 0.44
LRFN3Q9BTN0 RBPMS2P1-201ENST00000437762 623 ntBASIC17.8■□□□□ 0.44
LRFN3Q9BTN0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.8■□□□□ 0.44
LRFN3Q9BTN0 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.8■□□□□ 0.44
LRFN3Q9BTN0 AC069120.2-201ENST00000524091 540 ntBASIC17.8■□□□□ 0.44
LRFN3Q9BTN0 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.8■□□□□ 0.44
LRFN3Q9BTN0 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRFN3Q9BTN0 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.8■□□□□ 0.44
LRFN3Q9BTN0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRFN3Q9BTN0 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRFN3Q9BTN0 AC009102.3-201ENST00000623118 1491 ntBASIC17.8■□□□□ 0.44
LRFN3Q9BTN0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRFN3Q9BTN0 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRFN3Q9BTN0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
LRFN3Q9BTN0 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRFN3Q9BTN0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRFN3Q9BTN0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 AC004890.2-204ENST00000481968 304 ntBASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 AC122714.2-201ENST00000502787 707 ntBASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 CXCL1P1-201ENST00000502804 216 ntBASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 KRT18P41-201ENST00000518924 1277 ntBASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 SPTSSB-204ENST00000617024 1292 ntBASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 AL162274.1-201ENST00000617191 1098 ntBASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.79■□□□□ 0.44
LRFN3Q9BTN0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRFN3Q9BTN0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.78■□□□□ 0.44
LRFN3Q9BTN0 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRFN3Q9BTN0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRFN3Q9BTN0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRFN3Q9BTN0 AL024508.2-201ENST00000607749 1894 ntBASIC17.78■□□□□ 0.44
LRFN3Q9BTN0 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRFN3Q9BTN0 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRFN3Q9BTN0 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRFN3Q9BTN0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRFN3Q9BTN0 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRFN3Q9BTN0 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.78■□□□□ 0.44
LRFN3Q9BTN0 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
LRFN3Q9BTN0 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
LRFN3Q9BTN0 AC002056.1-201ENST00000395613 760 ntBASIC17.78■□□□□ 0.44
LRFN3Q9BTN0 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
LRFN3Q9BTN0 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.78■□□□□ 0.44
LRFN3Q9BTN0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRFN3Q9BTN0 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.78■□□□□ 0.44
LRFN3Q9BTN0 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRFN3Q9BTN0 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.78■□□□□ 0.44
LRFN3Q9BTN0 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.78■□□□□ 0.44
LRFN3Q9BTN0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.78■□□□□ 0.44
LRFN3Q9BTN0 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.78■□□□□ 0.44
LRFN3Q9BTN0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRFN3Q9BTN0 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRFN3Q9BTN0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRFN3Q9BTN0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRFN3Q9BTN0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.78■□□□□ 0.44
LRFN3Q9BTN0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms