Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM9SF2Q99805 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.7■□□□□ 0.26
TM9SF2Q99805 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.7■□□□□ 0.26
TM9SF2Q99805 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM9SF2Q99805 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TM9SF2Q99805 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM9SF2Q99805 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TM9SF2Q99805 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TM9SF2Q99805 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TM9SF2Q99805 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.7■□□□□ 0.26
TM9SF2Q99805 AC112907.2-201ENST00000448639 330 ntBASIC16.7■□□□□ 0.26
TM9SF2Q99805 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.7■□□□□ 0.26
TM9SF2Q99805 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.7■□□□□ 0.26
TM9SF2Q99805 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
TM9SF2Q99805 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.7■□□□□ 0.26
TM9SF2Q99805 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.7■□□□□ 0.26
TM9SF2Q99805 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TM9SF2Q99805 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM9SF2Q99805 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM9SF2Q99805 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM9SF2Q99805 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM9SF2Q99805 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TM9SF2Q99805 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM9SF2Q99805 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TM9SF2Q99805 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM9SF2Q99805 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM9SF2Q99805 AC135776.1-201ENST00000319817 2481 ntBASIC16.7■□□□□ 0.26
TM9SF2Q99805 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TM9SF2Q99805 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
TM9SF2Q99805 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TM9SF2Q99805 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM9SF2Q99805 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM9SF2Q99805 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM9SF2Q99805 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM9SF2Q99805 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM9SF2Q99805 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM9SF2Q99805 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM9SF2Q99805 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM9SF2Q99805 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.69■□□□□ 0.26
TM9SF2Q99805 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM9SF2Q99805 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM9SF2Q99805 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TM9SF2Q99805 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM9SF2Q99805 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TM9SF2Q99805 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM9SF2Q99805 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.69■□□□□ 0.26
TM9SF2Q99805 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
TM9SF2Q99805 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM9SF2Q99805 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM9SF2Q99805 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.69■□□□□ 0.26
TM9SF2Q99805 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.69■□□□□ 0.26
TM9SF2Q99805 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.69■□□□□ 0.26
TM9SF2Q99805 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.69■□□□□ 0.26
TM9SF2Q99805 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM9SF2Q99805 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM9SF2Q99805 AL499627.1-201ENST00000569373 2188 ntBASIC16.69■□□□□ 0.26
TM9SF2Q99805 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
TM9SF2Q99805 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TM9SF2Q99805 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM9SF2Q99805 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM9SF2Q99805 RCC2P3-201ENST00000418112 1537 ntBASIC16.69■□□□□ 0.26
TM9SF2Q99805 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TM9SF2Q99805 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM9SF2Q99805 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.69■□□□□ 0.26
TM9SF2Q99805 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TM9SF2Q99805 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.69■□□□□ 0.26
TM9SF2Q99805 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TM9SF2Q99805 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.69■□□□□ 0.26
TM9SF2Q99805 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.68■□□□□ 0.26
TM9SF2Q99805 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TM9SF2Q99805 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
TM9SF2Q99805 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TM9SF2Q99805 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TM9SF2Q99805 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.68■□□□□ 0.26
TM9SF2Q99805 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TM9SF2Q99805 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TM9SF2Q99805 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TM9SF2Q99805 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TM9SF2Q99805 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.68■□□□□ 0.26
TM9SF2Q99805 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TM9SF2Q99805 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TM9SF2Q99805 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TM9SF2Q99805 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TM9SF2Q99805 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TM9SF2Q99805 PCED1CP-201ENST00000419887 785 ntBASIC16.68■□□□□ 0.26
TM9SF2Q99805 UPK3BP1-201ENST00000428678 509 ntBASIC16.68■□□□□ 0.26
TM9SF2Q99805 KRT18P38-201ENST00000449496 1282 ntBASIC16.68■□□□□ 0.26
TM9SF2Q99805 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.68■□□□□ 0.26
TM9SF2Q99805 FAM86EP-206ENST00000510506 987 ntBASIC16.68■□□□□ 0.26
TM9SF2Q99805 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.68■□□□□ 0.26
TM9SF2Q99805 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.68■□□□□ 0.26
TM9SF2Q99805 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TM9SF2Q99805 AC024243.1-201ENST00000609234 778 ntBASIC16.68■□□□□ 0.26
TM9SF2Q99805 AC112497.1-201ENST00000624824 639 ntBASIC16.68■□□□□ 0.26
TM9SF2Q99805 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.68■□□□□ 0.26
TM9SF2Q99805 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TM9SF2Q99805 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TM9SF2Q99805 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.68■□□□□ 0.26
TM9SF2Q99805 KRT8P7-201ENST00000533003 1432 ntBASIC16.68■□□□□ 0.26
TM9SF2Q99805 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms