Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
GAFA1Q96PS6 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 AC018470.1-201ENST00000624790 3129 ntBASIC14.94□□□□□ -0.02
GAFA1Q96PS6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
GAFA1Q96PS6 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 KRT18P1-202ENST00000452408 1331 ntBASIC14.93□□□□□ -0.02
GAFA1Q96PS6 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 AL845331.1-201ENST00000424978 1190 ntBASIC14.93□□□□□ -0.02
GAFA1Q96PS6 AP002383.4-201ENST00000442518 975 ntBASIC14.93□□□□□ -0.02
GAFA1Q96PS6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 MCC-208ENST00000514701 2855 ntTSL 2 BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
GAFA1Q96PS6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GAFA1Q96PS6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GAFA1Q96PS6 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GAFA1Q96PS6 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GAFA1Q96PS6 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
GAFA1Q96PS6 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.92□□□□□ -0.02
GAFA1Q96PS6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GAFA1Q96PS6 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GAFA1Q96PS6 NOC2LP2-201ENST00000407594 1944 ntBASIC14.92□□□□□ -0.02
GAFA1Q96PS6 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
GAFA1Q96PS6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GAFA1Q96PS6 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GAFA1Q96PS6 UPK3BP1-201ENST00000428678 509 ntBASIC14.92□□□□□ -0.02
GAFA1Q96PS6 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.92□□□□□ -0.02
GAFA1Q96PS6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.92□□□□□ -0.02
GAFA1Q96PS6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms