Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF48Q96MX3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.62□□□□□ -0.07
ZNF48Q96MX3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
ZNF48Q96MX3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF48Q96MX3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ZNF48Q96MX3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.61□□□□□ -0.07
ZNF48Q96MX3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF48Q96MX3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF48Q96MX3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
ZNF48Q96MX3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.61□□□□□ -0.07
ZNF48Q96MX3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF48Q96MX3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF48Q96MX3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC14.61□□□□□ -0.07
ZNF48Q96MX3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF48Q96MX3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
ZNF48Q96MX3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF48Q96MX3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.61□□□□□ -0.07
ZNF48Q96MX3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.61□□□□□ -0.07
ZNF48Q96MX3 AC068472.1-201ENST00000474589 881 ntBASIC14.61□□□□□ -0.07
ZNF48Q96MX3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.61□□□□□ -0.07
ZNF48Q96MX3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
ZNF48Q96MX3 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF48Q96MX3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.61□□□□□ -0.07
ZNF48Q96MX3 AC114341.1-201ENST00000618070 349 ntBASIC14.61□□□□□ -0.07
ZNF48Q96MX3 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.61□□□□□ -0.07
ZNF48Q96MX3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.61□□□□□ -0.07
ZNF48Q96MX3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF48Q96MX3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.61□□□□□ -0.07
ZNF48Q96MX3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF48Q96MX3 AL499627.1-201ENST00000569373 2188 ntBASIC14.61□□□□□ -0.07
ZNF48Q96MX3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF48Q96MX3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF48Q96MX3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
ZNF48Q96MX3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF48Q96MX3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF48Q96MX3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ZNF48Q96MX3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
ZNF48Q96MX3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 AL590627.1-203ENST00000421194 1026 ntBASIC14.6□□□□□ -0.07
ZNF48Q96MX3 FAM197Y8-203ENST00000450145 560 ntBASIC14.6□□□□□ -0.07
ZNF48Q96MX3 AC132008.2-207ENST00000454517 770 ntBASIC14.6□□□□□ -0.07
ZNF48Q96MX3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 BX640515.1-201ENST00000617215 977 ntBASIC14.6□□□□□ -0.07
ZNF48Q96MX3 AC023511.2-201ENST00000618803 211 ntBASIC14.6□□□□□ -0.07
ZNF48Q96MX3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ZNF48Q96MX3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC14.59□□□□□ -0.07
ZNF48Q96MX3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZNF48Q96MX3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
ZNF48Q96MX3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZNF48Q96MX3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZNF48Q96MX3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ZNF48Q96MX3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZNF48Q96MX3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZNF48Q96MX3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ZNF48Q96MX3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZNF48Q96MX3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ZNF48Q96MX3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZNF48Q96MX3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ZNF48Q96MX3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ZNF48Q96MX3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.59□□□□□ -0.07
ZNF48Q96MX3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
ZNF48Q96MX3 RCN1P2-201ENST00000398357 915 ntBASIC14.59□□□□□ -0.07
ZNF48Q96MX3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
ZNF48Q96MX3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.59□□□□□ -0.07
ZNF48Q96MX3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
ZNF48Q96MX3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.59□□□□□ -0.07
ZNF48Q96MX3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms