Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPGRIP1Q96KN7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.82■□□□□ 0.76
RPGRIP1Q96KN7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RPGRIP1Q96KN7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RPGRIP1Q96KN7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPGRIP1Q96KN7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RPGRIP1Q96KN7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.82■□□□□ 0.76
RPGRIP1Q96KN7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
RPGRIP1Q96KN7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 TSPY19P-201ENST00000418461 509 ntBASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 TSPY18P-201ENST00000441642 509 ntBASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 KRT8P26-201ENST00000534154 1276 ntBASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 LINC01711-201ENST00000598340 967 ntBASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 HEIH-201ENST00000623091 1652 ntBASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
RPGRIP1Q96KN7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 AP000867.3-201ENST00000524675 377 ntBASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 AL121772.3-201ENST00000610840 674 ntBASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPGRIP1Q96KN7 HTR7P1-202ENST00000624664 4411 ntBASIC19.79■□□□□ 0.76
RPGRIP1Q96KN7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.79■□□□□ 0.76
RPGRIP1Q96KN7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RPGRIP1Q96KN7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPGRIP1Q96KN7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms