Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 LINC00304-203ENST00000565008 1864 ntBASIC17.11■□□□□ 0.33
LRRC58Q96CX6 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC58Q96CX6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC58Q96CX6 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC58Q96CX6 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC58Q96CX6 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.1■□□□□ 0.33
LRRC58Q96CX6 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC58Q96CX6 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LRRC58Q96CX6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.1■□□□□ 0.33
LRRC58Q96CX6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.1■□□□□ 0.33
LRRC58Q96CX6 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC58Q96CX6 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC58Q96CX6 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC58Q96CX6 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC58Q96CX6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC58Q96CX6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.1■□□□□ 0.33
LRRC58Q96CX6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LRRC58Q96CX6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC58Q96CX6 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.1■□□□□ 0.33
LRRC58Q96CX6 NUDT16P1-203ENST00000513809 620 ntBASIC17.1■□□□□ 0.33
LRRC58Q96CX6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.1■□□□□ 0.33
LRRC58Q96CX6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.1■□□□□ 0.33
LRRC58Q96CX6 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.1■□□□□ 0.33
LRRC58Q96CX6 AC104390.1-201ENST00000555663 520 ntBASIC17.1■□□□□ 0.33
LRRC58Q96CX6 WWOX-216ENST00000569818 525 ntBASIC17.1■□□□□ 0.33
LRRC58Q96CX6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
LRRC58Q96CX6 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
LRRC58Q96CX6 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC58Q96CX6 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LRRC58Q96CX6 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.1■□□□□ 0.33
LRRC58Q96CX6 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC58Q96CX6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC58Q96CX6 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC58Q96CX6 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC58Q96CX6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC58Q96CX6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC58Q96CX6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC58Q96CX6 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
LRRC58Q96CX6 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRC58Q96CX6 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.09■□□□□ 0.33
LRRC58Q96CX6 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC58Q96CX6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC58Q96CX6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC58Q96CX6 CRYGFP-201ENST00000418459 633 ntBASIC17.09■□□□□ 0.33
LRRC58Q96CX6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LRRC58Q96CX6 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.09■□□□□ 0.33
LRRC58Q96CX6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.09■□□□□ 0.33
LRRC58Q96CX6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.09■□□□□ 0.33
LRRC58Q96CX6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRC58Q96CX6 MIR4651-201ENST00000582622 73 ntBASIC17.09■□□□□ 0.33
LRRC58Q96CX6 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
LRRC58Q96CX6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.09■□□□□ 0.33
LRRC58Q96CX6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC58Q96CX6 CR769767.2-201ENST00000622735 460 ntBASIC17.09■□□□□ 0.33
LRRC58Q96CX6 AC066615.1-201ENST00000640911 628 ntBASIC17.09■□□□□ 0.33
LRRC58Q96CX6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
LRRC58Q96CX6 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC58Q96CX6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRC58Q96CX6 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC58Q96CX6 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC58Q96CX6 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC58Q96CX6 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC58Q96CX6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRC58Q96CX6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LRRC58Q96CX6 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.09■□□□□ 0.33
LRRC58Q96CX6 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC58Q96CX6 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC58Q96CX6 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC58Q96CX6 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.09■□□□□ 0.33
LRRC58Q96CX6 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC58Q96CX6 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
LRRC58Q96CX6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.08■□□□□ 0.33
LRRC58Q96CX6 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.08■□□□□ 0.33
LRRC58Q96CX6 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRC58Q96CX6 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRC58Q96CX6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.08■□□□□ 0.33
LRRC58Q96CX6 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LRRC58Q96CX6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.08■□□□□ 0.33
LRRC58Q96CX6 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
LRRC58Q96CX6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRC58Q96CX6 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRC58Q96CX6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LRRC58Q96CX6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
LRRC58Q96CX6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.08■□□□□ 0.32
LRRC58Q96CX6 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
LRRC58Q96CX6 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC58Q96CX6 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC58Q96CX6 HLA-J-201ENST00000462773 1622 ntBASIC17.08■□□□□ 0.32
LRRC58Q96CX6 AL135905.2-201ENST00000584934 1404 ntBASIC17.08■□□□□ 0.32
LRRC58Q96CX6 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC58Q96CX6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC58Q96CX6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.08■□□□□ 0.32
LRRC58Q96CX6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC58Q96CX6 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms