Protein–RNA interactions for Protein: Q96CG3

TIFA, TRAF-interacting protein with FHA domain-containing protein A, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIFAQ96CG3 AC004706.3-202ENST00000621574 984 ntBASIC19.14■□□□□ 0.65
TIFAQ96CG3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TIFAQ96CG3 SIGLEC16-201ENST00000599858 1437 ntBASIC19.14■□□□□ 0.65
TIFAQ96CG3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.14■□□□□ 0.65
TIFAQ96CG3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TIFAQ96CG3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TIFAQ96CG3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TIFAQ96CG3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TIFAQ96CG3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TIFAQ96CG3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TIFAQ96CG3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TIFAQ96CG3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TIFAQ96CG3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TIFAQ96CG3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TIFAQ96CG3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.13■□□□□ 0.65
TIFAQ96CG3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TIFAQ96CG3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TIFAQ96CG3 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.13■□□□□ 0.65
TIFAQ96CG3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
TIFAQ96CG3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TIFAQ96CG3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TIFAQ96CG3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.13■□□□□ 0.65
TIFAQ96CG3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TIFAQ96CG3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TIFAQ96CG3 AC025678.2-201ENST00000562061 970 ntBASIC19.13■□□□□ 0.65
TIFAQ96CG3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.13■□□□□ 0.65
TIFAQ96CG3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TIFAQ96CG3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TIFAQ96CG3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.13■□□□□ 0.65
TIFAQ96CG3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TIFAQ96CG3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TIFAQ96CG3 AC006504.4-201ENST00000592118 1568 ntBASIC19.13■□□□□ 0.65
TIFAQ96CG3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TIFAQ96CG3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TIFAQ96CG3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TIFAQ96CG3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.13■□□□□ 0.65
TIFAQ96CG3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TIFAQ96CG3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.12■□□□□ 0.65
TIFAQ96CG3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TIFAQ96CG3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.12■□□□□ 0.65
TIFAQ96CG3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
TIFAQ96CG3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TIFAQ96CG3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.12■□□□□ 0.65
TIFAQ96CG3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TIFAQ96CG3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TIFAQ96CG3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TIFAQ96CG3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TIFAQ96CG3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
TIFAQ96CG3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.12■□□□□ 0.65
TIFAQ96CG3 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.12■□□□□ 0.65
TIFAQ96CG3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.12■□□□□ 0.65
TIFAQ96CG3 GK-202ENST00000378941 458 ntTSL 3 BASIC19.12■□□□□ 0.65
TIFAQ96CG3 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.12■□□□□ 0.65
TIFAQ96CG3 SPDYE21P-201ENST00000413323 827 ntBASIC19.12■□□□□ 0.65
TIFAQ96CG3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TIFAQ96CG3 FAM58CP-201ENST00000435741 640 ntBASIC19.12■□□□□ 0.65
TIFAQ96CG3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TIFAQ96CG3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.12■□□□□ 0.65
TIFAQ96CG3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.12■□□□□ 0.65
TIFAQ96CG3 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.12■□□□□ 0.65
TIFAQ96CG3 IGHV3-65-201ENST00000523210 341 ntBASIC19.12■□□□□ 0.65
TIFAQ96CG3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TIFAQ96CG3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.12■□□□□ 0.65
TIFAQ96CG3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TIFAQ96CG3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.12■□□□□ 0.65
TIFAQ96CG3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TIFAQ96CG3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
TIFAQ96CG3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TIFAQ96CG3 AC141586.3-201ENST00000562166 1838 ntBASIC19.11■□□□□ 0.65
TIFAQ96CG3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TIFAQ96CG3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.11■□□□□ 0.65
TIFAQ96CG3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TIFAQ96CG3 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.11■□□□□ 0.65
TIFAQ96CG3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.11■□□□□ 0.65
TIFAQ96CG3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.11■□□□□ 0.65
TIFAQ96CG3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TIFAQ96CG3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TIFAQ96CG3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TIFAQ96CG3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TIFAQ96CG3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TIFAQ96CG3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TIFAQ96CG3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TIFAQ96CG3 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TIFAQ96CG3 METTL26-204ENST00000397665 558 ntTSL 2 BASIC19.11■□□□□ 0.65
TIFAQ96CG3 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.11■□□□□ 0.65
TIFAQ96CG3 AC015922.1-201ENST00000421102 1152 ntBASIC19.11■□□□□ 0.65
TIFAQ96CG3 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TIFAQ96CG3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TIFAQ96CG3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.11■□□□□ 0.65
TIFAQ96CG3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TIFAQ96CG3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.11■□□□□ 0.65
TIFAQ96CG3 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.11■□□□□ 0.65
TIFAQ96CG3 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.11■□□□□ 0.65
TIFAQ96CG3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TIFAQ96CG3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
TIFAQ96CG3 AC004790.2-201ENST00000623588 572 ntBASIC19.11■□□□□ 0.65
TIFAQ96CG3 AC004877.2-201ENST00000623941 599 ntBASIC19.11■□□□□ 0.65
TIFAQ96CG3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TIFAQ96CG3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TIFAQ96CG3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms