Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.94■□□□□ 0.62
ATP2A3Q93084 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.94■□□□□ 0.62
ATP2A3Q93084 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ATP2A3Q93084 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
ATP2A3Q93084 VENTXP7-201ENST00000475503 772 ntBASIC18.94■□□□□ 0.62
ATP2A3Q93084 KRT18P31-201ENST00000506277 1292 ntBASIC18.94■□□□□ 0.62
ATP2A3Q93084 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.94■□□□□ 0.62
ATP2A3Q93084 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.94■□□□□ 0.62
ATP2A3Q93084 AL592071.1-201ENST00000611956 408 ntBASIC18.94■□□□□ 0.62
ATP2A3Q93084 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.94■□□□□ 0.62
ATP2A3Q93084 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.94■□□□□ 0.62
ATP2A3Q93084 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
ATP2A3Q93084 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.94■□□□□ 0.62
ATP2A3Q93084 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.94■□□□□ 0.62
ATP2A3Q93084 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.94■□□□□ 0.62
ATP2A3Q93084 MTMR9LP-203ENST00000426597 1545 ntBASIC18.94■□□□□ 0.62
ATP2A3Q93084 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
ATP2A3Q93084 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.94■□□□□ 0.62
ATP2A3Q93084 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ATP2A3Q93084 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.94■□□□□ 0.62
ATP2A3Q93084 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATP2A3Q93084 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
ATP2A3Q93084 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATP2A3Q93084 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATP2A3Q93084 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATP2A3Q93084 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATP2A3Q93084 LINC00167-201ENST00000530583 1419 ntBASIC18.93■□□□□ 0.62
ATP2A3Q93084 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATP2A3Q93084 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.93■□□□□ 0.62
ATP2A3Q93084 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATP2A3Q93084 AL354751.1-201ENST00000412768 1863 ntBASIC18.93■□□□□ 0.62
ATP2A3Q93084 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATP2A3Q93084 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATP2A3Q93084 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.93■□□□□ 0.62
ATP2A3Q93084 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
ATP2A3Q93084 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATP2A3Q93084 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATP2A3Q93084 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.93■□□□□ 0.62
ATP2A3Q93084 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATP2A3Q93084 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.93■□□□□ 0.62
ATP2A3Q93084 AC124864.1-201ENST00000623408 392 ntBASIC18.93■□□□□ 0.62
ATP2A3Q93084 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.93■□□□□ 0.62
ATP2A3Q93084 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
ATP2A3Q93084 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.93■□□□□ 0.62
ATP2A3Q93084 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATP2A3Q93084 AL499627.1-201ENST00000569373 2188 ntBASIC18.93■□□□□ 0.62
ATP2A3Q93084 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ATP2A3Q93084 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.93■□□□□ 0.62
ATP2A3Q93084 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATP2A3Q93084 AC018470.1-201ENST00000624790 3129 ntBASIC18.93■□□□□ 0.62
ATP2A3Q93084 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
ATP2A3Q93084 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
ATP2A3Q93084 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.93■□□□□ 0.62
ATP2A3Q93084 AL353692.3-201ENST00000407031 1396 ntBASIC18.93■□□□□ 0.62
ATP2A3Q93084 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
ATP2A3Q93084 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A3Q93084 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A3Q93084 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.92■□□□□ 0.62
ATP2A3Q93084 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A3Q93084 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.92■□□□□ 0.62
ATP2A3Q93084 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A3Q93084 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A3Q93084 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A3Q93084 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A3Q93084 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A3Q93084 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ATP2A3Q93084 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A3Q93084 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A3Q93084 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.92■□□□□ 0.62
ATP2A3Q93084 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A3Q93084 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A3Q93084 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.92■□□□□ 0.62
ATP2A3Q93084 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ATP2A3Q93084 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A3Q93084 AL163051.1-201ENST00000569214 1512 ntBASIC18.92■□□□□ 0.62
ATP2A3Q93084 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A3Q93084 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.92■□□□□ 0.62
ATP2A3Q93084 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A3Q93084 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.92■□□□□ 0.62
ATP2A3Q93084 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.92■□□□□ 0.62
ATP2A3Q93084 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A3Q93084 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A3Q93084 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.92■□□□□ 0.62
ATP2A3Q93084 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ATP2A3Q93084 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ATP2A3Q93084 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A3Q93084 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
ATP2A3Q93084 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A3Q93084 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ATP2A3Q93084 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ATP2A3Q93084 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ATP2A3Q93084 KRT8P10-201ENST00000450021 1447 ntBASIC18.91■□□□□ 0.62
ATP2A3Q93084 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
ATP2A3Q93084 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP2A3Q93084 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ATP2A3Q93084 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP2A3Q93084 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP2A3Q93084 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP2A3Q93084 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.91■□□□□ 0.62
ATP2A3Q93084 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms