Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 ACTG1P17-201ENST00000558391 1119 ntBASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 PIGL-212ENST00000581006 554 ntTSL 4 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC7.2□□□□□ -1.26
SYNE2Q8WXH0 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 EIF5AP2-201ENST00000585668 1047 ntBASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 AC104989.1-201ENST00000519711 778 ntBASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 RPS24-214ENST00000613865 538 ntTSL 5 BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 AC011495.1-201ENST00000498085 584 ntBASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 AC141586.1-203ENST00000567242 366 ntBASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 AL590560.3-201ENST00000623350 461 ntBASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 AL391825.1-201ENST00000457671 1364 ntBASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 AC018665.1-201ENST00000622927 1362 ntBASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 HNRNPA3P5-201ENST00000455201 833 ntBASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 NCF1C-201ENST00000438382 1427 ntBASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 AC104306.2-201ENST00000451877 341 ntBASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 AL135744.1-201ENST00000565098 629 ntBASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 MIR4750-201ENST00000584564 56 ntBASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 PLK5-205ENST00000642079 1969 ntBASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC7.19□□□□□ -1.26
SYNE2Q8WXH0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE2Q8WXH0 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms