Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 TSPY17P-201ENST00000450329 467 ntBASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 LINC01451-201ENST00000623792 534 ntBASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 AC092338.2-201ENST00000568827 1415 ntBASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RPS4Y2Q8TD47 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 AC011676.5-201ENST00000624864 2660 ntBASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 REXO1L11P-201ENST00000620964 1927 ntBASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 AL596275.1-201ENST00000423464 877 ntBASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 MIR4785-201ENST00000585005 73 ntBASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RPS4Y2Q8TD47 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RPS4Y2Q8TD47 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.72■□□□□ 0.11
RPS4Y2Q8TD47 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPS4Y2Q8TD47 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.72■□□□□ 0.11
RPS4Y2Q8TD47 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPS4Y2Q8TD47 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPS4Y2Q8TD47 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.72■□□□□ 0.11
RPS4Y2Q8TD47 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.72■□□□□ 0.11
RPS4Y2Q8TD47 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RPS4Y2Q8TD47 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.72■□□□□ 0.11
RPS4Y2Q8TD47 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RPS4Y2Q8TD47 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RPS4Y2Q8TD47 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.72■□□□□ 0.11
RPS4Y2Q8TD47 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
RPS4Y2Q8TD47 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.72■□□□□ 0.11
RPS4Y2Q8TD47 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPS4Y2Q8TD47 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.72■□□□□ 0.11
RPS4Y2Q8TD47 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.72■□□□□ 0.11
RPS4Y2Q8TD47 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.72■□□□□ 0.11
RPS4Y2Q8TD47 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.72■□□□□ 0.11
RPS4Y2Q8TD47 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.72■□□□□ 0.11
RPS4Y2Q8TD47 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.72■□□□□ 0.11
RPS4Y2Q8TD47 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.72■□□□□ 0.11
RPS4Y2Q8TD47 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RPS4Y2Q8TD47 AC113410.3-201ENST00000623366 203 ntBASIC15.72■□□□□ 0.11
RPS4Y2Q8TD47 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
RPS4Y2Q8TD47 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms