Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 KRT18P41-201ENST00000518924 1277 ntBASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 AC012615.1-201ENST00000565797 1299 ntBASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 ABALON-201ENST00000629058 1903 ntBASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.29■□□□□ 0.04
CLDND2Q8NHS1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 AL163051.1-201ENST00000569214 1512 ntBASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 RN7SL510P-201ENST00000581311 263 ntBASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
CLDND2Q8NHS1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CLDND2Q8NHS1 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDND2Q8NHS1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDND2Q8NHS1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDND2Q8NHS1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLDND2Q8NHS1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDND2Q8NHS1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDND2Q8NHS1 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDND2Q8NHS1 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDND2Q8NHS1 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
CLDND2Q8NHS1 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CLDND2Q8NHS1 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.27■□□□□ 0.04
CLDND2Q8NHS1 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDND2Q8NHS1 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLDND2Q8NHS1 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
CLDND2Q8NHS1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDND2Q8NHS1 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
CLDND2Q8NHS1 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDND2Q8NHS1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDND2Q8NHS1 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDND2Q8NHS1 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDND2Q8NHS1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDND2Q8NHS1 AC104819.1-201ENST00000504587 486 ntBASIC15.27■□□□□ 0.04
CLDND2Q8NHS1 GUSBP12-201ENST00000513727 720 ntBASIC15.27■□□□□ 0.04
CLDND2Q8NHS1 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDND2Q8NHS1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLDND2Q8NHS1 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CLDND2Q8NHS1 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDND2Q8NHS1 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLDND2Q8NHS1 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDND2Q8NHS1 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.27■□□□□ 0.04
CLDND2Q8NHS1 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.27■□□□□ 0.04
CLDND2Q8NHS1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDND2Q8NHS1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDND2Q8NHS1 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDND2Q8NHS1 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDND2Q8NHS1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.27■□□□□ 0.03
CLDND2Q8NHS1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CLDND2Q8NHS1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.27■□□□□ 0.03
CLDND2Q8NHS1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CLDND2Q8NHS1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms