Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.84■□□□□ 0.29
NUP43Q8NFH3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
NUP43Q8NFH3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
NUP43Q8NFH3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 AC104076.2-201ENST00000448912 469 ntBASIC16.83■□□□□ 0.28
NUP43Q8NFH3 AC092647.4-201ENST00000457211 535 ntBASIC16.83■□□□□ 0.28
NUP43Q8NFH3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 AC006116.8-202ENST00000587620 1550 ntBASIC16.83■□□□□ 0.28
NUP43Q8NFH3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NUP43Q8NFH3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NUP43Q8NFH3 AC100803.2-201ENST00000562459 1963 ntBASIC16.82■□□□□ 0.28
NUP43Q8NFH3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NUP43Q8NFH3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NUP43Q8NFH3 PKD1P1-201ENST00000458669 6805 ntBASIC16.82■□□□□ 0.28
NUP43Q8NFH3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NUP43Q8NFH3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
NUP43Q8NFH3 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NUP43Q8NFH3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NUP43Q8NFH3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.82■□□□□ 0.28
NUP43Q8NFH3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.82■□□□□ 0.28
NUP43Q8NFH3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
NUP43Q8NFH3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.82■□□□□ 0.28
NUP43Q8NFH3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NUP43Q8NFH3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
NUP43Q8NFH3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
NUP43Q8NFH3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NUP43Q8NFH3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.82■□□□□ 0.28
NUP43Q8NFH3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NUP43Q8NFH3 AC112907.2-201ENST00000448639 330 ntBASIC16.82■□□□□ 0.28
NUP43Q8NFH3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.82■□□□□ 0.28
NUP43Q8NFH3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms