Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF248Q8NDW4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF248Q8NDW4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
ZNF248Q8NDW4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.17■□□□□ 0.34
ZNF248Q8NDW4 FEM1AP3-201ENST00000403722 1741 ntBASIC17.17■□□□□ 0.34
ZNF248Q8NDW4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.17■□□□□ 0.34
ZNF248Q8NDW4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.17■□□□□ 0.34
ZNF248Q8NDW4 KRT18P3-201ENST00000451602 1288 ntBASIC17.17■□□□□ 0.34
ZNF248Q8NDW4 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.17■□□□□ 0.34
ZNF248Q8NDW4 AC112777.1-201ENST00000540175 1423 ntBASIC17.17■□□□□ 0.34
ZNF248Q8NDW4 AC009533.2-201ENST00000543664 586 ntBASIC17.17■□□□□ 0.34
ZNF248Q8NDW4 AC040169.1-201ENST00000565382 521 ntBASIC17.17■□□□□ 0.34
ZNF248Q8NDW4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.17■□□□□ 0.34
ZNF248Q8NDW4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.17■□□□□ 0.34
ZNF248Q8NDW4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.17■□□□□ 0.34
ZNF248Q8NDW4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF248Q8NDW4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ZNF248Q8NDW4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
ZNF248Q8NDW4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF248Q8NDW4 AC022898.2-201ENST00000616822 1312 ntBASIC17.17■□□□□ 0.34
ZNF248Q8NDW4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
ZNF248Q8NDW4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.17■□□□□ 0.34
ZNF248Q8NDW4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF248Q8NDW4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.17■□□□□ 0.34
ZNF248Q8NDW4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
ZNF248Q8NDW4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZNF248Q8NDW4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
ZNF248Q8NDW4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF248Q8NDW4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF248Q8NDW4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
ZNF248Q8NDW4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ZNF248Q8NDW4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF248Q8NDW4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ZNF248Q8NDW4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF248Q8NDW4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
ZNF248Q8NDW4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF248Q8NDW4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ZNF248Q8NDW4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF248Q8NDW4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF248Q8NDW4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF248Q8NDW4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.16■□□□□ 0.34
ZNF248Q8NDW4 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.16■□□□□ 0.34
ZNF248Q8NDW4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF248Q8NDW4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF248Q8NDW4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.16■□□□□ 0.34
ZNF248Q8NDW4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.16■□□□□ 0.34
ZNF248Q8NDW4 AC004967.1-201ENST00000453589 447 ntBASIC17.16■□□□□ 0.34
ZNF248Q8NDW4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.16■□□□□ 0.34
ZNF248Q8NDW4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.16■□□□□ 0.34
ZNF248Q8NDW4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.16■□□□□ 0.34
ZNF248Q8NDW4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
ZNF248Q8NDW4 AP001269.4-201ENST00000609611 512 ntBASIC17.16■□□□□ 0.34
ZNF248Q8NDW4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.16■□□□□ 0.34
ZNF248Q8NDW4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF248Q8NDW4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.16■□□□□ 0.34
ZNF248Q8NDW4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF248Q8NDW4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.16■□□□□ 0.34
ZNF248Q8NDW4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF248Q8NDW4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.16■□□□□ 0.34
ZNF248Q8NDW4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF248Q8NDW4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 AC092910.1-201ENST00000482027 1129 ntBASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 AC034105.1-201ENST00000563488 319 ntBASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 Z83851.2-201ENST00000609564 659 ntBASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF248Q8NDW4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF248Q8NDW4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms