Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RETREG2Q8NC44 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RETREG2Q8NC44 KRT89P-201ENST00000620027 1478 ntBASIC20.35■□□□□ 0.85
RETREG2Q8NC44 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RETREG2Q8NC44 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RETREG2Q8NC44 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RETREG2Q8NC44 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.35■□□□□ 0.85
RETREG2Q8NC44 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.35■□□□□ 0.85
RETREG2Q8NC44 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.35■□□□□ 0.85
RETREG2Q8NC44 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RETREG2Q8NC44 MYLKP1-201ENST00000509077 1580 ntBASIC20.34■□□□□ 0.85
RETREG2Q8NC44 HLA-A-201ENST00000376802 1334 ntBASIC20.34■□□□□ 0.85
RETREG2Q8NC44 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RETREG2Q8NC44 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.34■□□□□ 0.85
RETREG2Q8NC44 NSUN5P1-202ENST00000421140 1535 ntBASIC20.34■□□□□ 0.85
RETREG2Q8NC44 NSUN5P2-203ENST00000457352 1529 ntBASIC20.34■□□□□ 0.85
RETREG2Q8NC44 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RETREG2Q8NC44 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RETREG2Q8NC44 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
RETREG2Q8NC44 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RETREG2Q8NC44 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
RETREG2Q8NC44 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RETREG2Q8NC44 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RETREG2Q8NC44 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RETREG2Q8NC44 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RETREG2Q8NC44 SAPCD2P3-201ENST00000455031 850 ntBASIC20.34■□□□□ 0.85
RETREG2Q8NC44 MINOS1P3-201ENST00000457048 203 ntBASIC20.34■□□□□ 0.85
RETREG2Q8NC44 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.34■□□□□ 0.85
RETREG2Q8NC44 RN7SL606P-201ENST00000472779 293 ntBASIC20.34■□□□□ 0.85
RETREG2Q8NC44 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.34■□□□□ 0.85
RETREG2Q8NC44 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.34■□□□□ 0.85
RETREG2Q8NC44 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.34■□□□□ 0.85
RETREG2Q8NC44 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.34■□□□□ 0.85
RETREG2Q8NC44 AC011840.4-201ENST00000578471 627 ntBASIC20.34■□□□□ 0.85
RETREG2Q8NC44 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.34■□□□□ 0.85
RETREG2Q8NC44 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.34■□□□□ 0.85
RETREG2Q8NC44 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RETREG2Q8NC44 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.34■□□□□ 0.85
RETREG2Q8NC44 AC009102.3-201ENST00000623118 1491 ntBASIC20.34■□□□□ 0.85
RETREG2Q8NC44 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RETREG2Q8NC44 AC005332.8-201ENST00000622750 2735 ntBASIC20.34■□□□□ 0.85
RETREG2Q8NC44 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.34■□□□□ 0.85
RETREG2Q8NC44 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RETREG2Q8NC44 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RETREG2Q8NC44 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RETREG2Q8NC44 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
RETREG2Q8NC44 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RETREG2Q8NC44 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.34■□□□□ 0.85
RETREG2Q8NC44 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
RETREG2Q8NC44 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RETREG2Q8NC44 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RETREG2Q8NC44 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RETREG2Q8NC44 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
RETREG2Q8NC44 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RETREG2Q8NC44 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RETREG2Q8NC44 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RETREG2Q8NC44 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RETREG2Q8NC44 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RETREG2Q8NC44 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RETREG2Q8NC44 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RETREG2Q8NC44 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.33■□□□□ 0.85
RETREG2Q8NC44 NUS1P2-201ENST00000417358 873 ntBASIC20.33■□□□□ 0.85
RETREG2Q8NC44 AL590627.1-203ENST00000421194 1026 ntBASIC20.33■□□□□ 0.85
RETREG2Q8NC44 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.33■□□□□ 0.85
RETREG2Q8NC44 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.33■□□□□ 0.85
RETREG2Q8NC44 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.33■□□□□ 0.85
RETREG2Q8NC44 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.33■□□□□ 0.85
RETREG2Q8NC44 AC008687.5-201ENST00000593746 558 ntBASIC20.33■□□□□ 0.85
RETREG2Q8NC44 BX640515.1-201ENST00000617215 977 ntBASIC20.33■□□□□ 0.85
RETREG2Q8NC44 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.33■□□□□ 0.85
RETREG2Q8NC44 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.33■□□□□ 0.85
RETREG2Q8NC44 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RETREG2Q8NC44 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.33■□□□□ 0.84
RETREG2Q8NC44 AL353692.3-201ENST00000407031 1396 ntBASIC20.33■□□□□ 0.84
RETREG2Q8NC44 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RETREG2Q8NC44 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RETREG2Q8NC44 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RETREG2Q8NC44 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RETREG2Q8NC44 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RETREG2Q8NC44 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RETREG2Q8NC44 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RETREG2Q8NC44 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RETREG2Q8NC44 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.32■□□□□ 0.84
RETREG2Q8NC44 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RETREG2Q8NC44 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.32■□□□□ 0.84
RETREG2Q8NC44 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RETREG2Q8NC44 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.32■□□□□ 0.84
RETREG2Q8NC44 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.32■□□□□ 0.84
RETREG2Q8NC44 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.32■□□□□ 0.84
RETREG2Q8NC44 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.32■□□□□ 0.84
RETREG2Q8NC44 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
RETREG2Q8NC44 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.32■□□□□ 0.84
RETREG2Q8NC44 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RETREG2Q8NC44 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
RETREG2Q8NC44 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RETREG2Q8NC44 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.32■□□□□ 0.84
RETREG2Q8NC44 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RETREG2Q8NC44 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.32■□□□□ 0.84
RETREG2Q8NC44 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RETREG2Q8NC44 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms